Gene Slin_5428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5428 
Symbol 
ID8729195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6601283 
End bp6602452 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID 
ProductXanthine dehydrogenase 
Protein accessionYP_003390194 
Protein GI284040264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.8362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA TCAGTCGTAT TGTCGAGGTA TTTGAGCAAA TCGATTTTTC GCAGCGAAAA 
GCCGCTTTAG CCACCGTTGT TTGGGTGGAA GGGTCATCGT ATCGGCGTCC GGGTGCGCGT
ATGCTCATTA CGGACGACGG ACGCTGGGAA GGGGCCATAA GCGGGGGCTG TCTGGAAGGG
GATGCGTTAC GTAAAGCCCG ACAGGTAATG CTCGACGGGC AGCCGATTGT GGTTACCTAC
GATACAATGG ACGACGGCGC CAACAGCTTT GGCGTTGGCC TGGGCTGCAA CGGCATTATT
GACGTACTTA TTGAACCCAT TACGCCCAAT AGTGATCAGA ATCCAGTAGC CTTATTGAAA
GAATTTACGC AGAAGCGCGA TGTGCGGGCG TTGGCAACTG TGCTTAAAAG CAACGACTTT
ACGGGCCTTG CACCCGGCAA CCGCTTTACC CTTACTGAAG AAAACGCGGA GTCGATACCC
GGCTGGCTGC ACGATGACAT GCGTATGGTA TTTGAGACGG GCAAGCCGCT AACGCGCACC
TATCCGGTAC TGTCGGGAAA TGCCGAAGTG TTCATCGAGC GTATTGACCC CGGTATCGAG
CTGGTTATTT TCGGAGCAGG TTACGACGTT ATTCCGGTGG CCAAACTGGC CCGAGAACTT
GGCTGGCAGG TTACCGTTAC CGACGACTGC ATTGCGCACC TCTCGCCCAA ACGGTTTCCG
GTGGCTACCT GCGTGCTGTA CGCCGACCGC CAGGTAGTGA TCGACCAGCT TTCCATAACC
AACCGAACAG CCGCCGTGCT GATGTCGCAC AACTTCAATT ACGACCGGGC GGTGCTTGAA
AAGCTCCTCG CCACCGATGT TCCCTACATT GGTATGCTGG GGCCGCGCAA ACGGTTCGAC
AAAATGCAGG ATGAGTTCAG AAAAGACGGG CTGGAATTTA GTAAAGCCTC GCTTGGCCGG
GTTCATGCGC CCATTGGCCT GGACCTGGGT GCCGAAACGC CCGACGAAAT TGCCCTGTCT
ATTATGGCCG AAGTCAAAGC ATTTTTCACC AGAGGGGCCG CTGGCTTCCT GAAAAATAAA
CCCGGTCCGA TCCACGAACG ACTGTCCGGA AACTCCGCCG ATCACCACCG ACATACGGAC
GGGATAGGCC TTGACCTGGA TACAGTCTAA
 
Protein sequence
MKEISRIVEV FEQIDFSQRK AALATVVWVE GSSYRRPGAR MLITDDGRWE GAISGGCLEG 
DALRKARQVM LDGQPIVVTY DTMDDGANSF GVGLGCNGII DVLIEPITPN SDQNPVALLK
EFTQKRDVRA LATVLKSNDF TGLAPGNRFT LTEENAESIP GWLHDDMRMV FETGKPLTRT
YPVLSGNAEV FIERIDPGIE LVIFGAGYDV IPVAKLAREL GWQVTVTDDC IAHLSPKRFP
VATCVLYADR QVVIDQLSIT NRTAAVLMSH NFNYDRAVLE KLLATDVPYI GMLGPRKRFD
KMQDEFRKDG LEFSKASLGR VHAPIGLDLG AETPDEIALS IMAEVKAFFT RGAAGFLKNK
PGPIHERLSG NSADHHRHTD GIGLDLDTV