Gene Slin_5427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5427 
Symbol 
ID8729194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6599026 
End bp6601230 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content56% 
IMG OID 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003390193 
Protein GI284040263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CTCCTACCAG CACTGAAACC GGCACAAGCC GCCGGAACTT CCTAAAAGCT 
GCGGGCCTTA GCGGAGCGGC TTTTGCCCTG GGCTTTTCGT CAGTCGATTC CTTCGCCAGC
CCTGTACTGA ACCTAAGCGG TCAGTCGGGT CTTGCGCTGC CCGAATCCGT TGAACTGAAT
CCTTACATAC TCATTGAAAA GTCGGGACGT ATTGTTCTGA TGAACCCACG ACCCGAAATT
GGTCAGGGAA CCTACCAATC CATTCCGGCG CTCATTGCCG AAGAACTGGA AGTGTCGCTC
AACGACGTGA CCATTCGGCA AACCGGTGGC GAAACCAAAT ACGGTGGTAT GTGGTCGCAG
GCGGTGGGTG GTAGTGGCTC CGTTCGGGGT GGCTACATGC AGATGCGTAA AGTGGGGGCC
TCAGCCCGCG AGATGCTCCG GCAGGCCGCC AGCCAGCAGT GGGCGGTGCC CGTCGACGAG
TGTGTGGCCC AAAACGCGAC CATCGTTCAT AAGCCCAGCG GCAAAAAACT CACCTATGGC
CAACTCGCCG AGGTAGCTGC CAAGCTGCCT GTTCCAAAAG AGCCCGCGTT GAAAGACCCG
AAGCAGTTTT CGATGCTGGG TAAGCCCATG CCCCGGCCCG ATGTGCCGCT CAAAGTAGCC
GGACAGGCCA CGTTTGGTAT CGACGCCAAA GTGCCCGGCA TGGTTTACGC ATCTATTGAA
CGGTGTCCGG TATTGGGCAG CAAACTGGTC AGTTTCGATG CCTCCAAGTC CCTAAAGGTC
AAAGGTGTGC AGAAAGCCGT AAAAGTGGAG CGCGTAGTCG GCAAGAACCG CTACGAAGGC
GTCGCCATCA TTGCCGACAA TTACTGGGCT GCGTTACAGG GCCGGAAGGC ACTCCGCGTA
ACTTGGGACC ACAATAACTT CGATACGTTC AACTCGGTCG ATTTCGAGAA TAAACTTCGC
GATCTGGCCA AAACAGACGG TGTTCAGGGC CATAACACCG GAGATTTCGA CAAGTCGTTT
GCCGATGCTC CGAACAAAGT AGAGGCACTT TACGAAACGC CCATGGTGAG CCACTCAACC
ATGGAGCCCA TGAATGCACT GGCCCATTAC AAGCCCGACG GCAAAGTCGA ACTGTGGGTA
TCCTCGCAGG GCGGTGATCT GGTGCGTGGC GATGTCGCCA AAGTGCTGAA CGTAAAGCCG
GATGATATCA CCGTACATAT TCTGTTCAAC GGTGGTGGTT TCGGTCGGCG CATCACCCAG
GATTTTGCCA CCGAAGCCGC TACCCTGTCC AAAACGATTG GCAAACCCGT AAAGGTGGTC
TGGACGCGGG AAGACGATAC CCAACTGGGA CCTTTCCGAC CCATGACGTT CTCGGCCATG
CGGGGCGCAT TGTCTGCCGA TGGAAAAGCC ATTGCGCTTC AGCATAAAGT CATTTCGCCG
TCAATCGACG CGACGATGAA CGAAAAATAC GACAAGACGA AGGCCGACGA CACCATGCTC
GAAGGAACGG GGGATCAGAA ATACGAAATC CCGAACCTCA ACACGCGCTA TGTCCACGCC
GACATTCACG TGCCCCTCAC CTACTGGCGC TCGGTGACGA GTTCGACGCT GGCGTTCTCG
CACGAATGTT TCATCGACGA GATGGCCCAC AAAGCCGGGC AGGACCCGCT GGCCTTCCGG
ATGAGCATGC TTACGAAAGA CAGCGACGCC AAACGGGTGC TGACAAAACT AAAGGAAGTT
TCAGGCTGGG ATAACCCGCT GCCCGCAGGT AAGGGGCGTG GTATTGCCCA GTGGGAGTTT
TTCGCCGGAC TGGCGGGCCA GGTAGTCGAG GTATCAAAAA ACAAGACTGG TGGTATTACG
GTTGATAAAG TTTATTGTGT TATCGACCTC GGCACCGTTG TCAACCCCGA TAATGTGAAG
GCTCAGATGG AAGGGTCTAT CGCTATGGCC CTGACGGCGG CTACCAAAGA TGCGATCACC
TTTGAGAAGG GGCAGGCCGT TCAGAAAAAT TTCGACGCCA ACCGTATGCT CCGTATCAAC
GAGATGCCTA CCGTAGAAGT CCATATTCTA GCCGAAGGCG GCCCAACCAT TAAAGGGGTT
GGTGAGCCGG GACTGCCGCC ATTGGCTCCC GCACTCGCCA ATGCCATTTT TGCGGCTACC
GGCAAACGAA TTCGCCGGAT GCCATTTGAT TTGGAGAAAG TATAA
 
Protein sequence
MSTTPTSTET GTSRRNFLKA AGLSGAAFAL GFSSVDSFAS PVLNLSGQSG LALPESVELN 
PYILIEKSGR IVLMNPRPEI GQGTYQSIPA LIAEELEVSL NDVTIRQTGG ETKYGGMWSQ
AVGGSGSVRG GYMQMRKVGA SAREMLRQAA SQQWAVPVDE CVAQNATIVH KPSGKKLTYG
QLAEVAAKLP VPKEPALKDP KQFSMLGKPM PRPDVPLKVA GQATFGIDAK VPGMVYASIE
RCPVLGSKLV SFDASKSLKV KGVQKAVKVE RVVGKNRYEG VAIIADNYWA ALQGRKALRV
TWDHNNFDTF NSVDFENKLR DLAKTDGVQG HNTGDFDKSF ADAPNKVEAL YETPMVSHST
MEPMNALAHY KPDGKVELWV SSQGGDLVRG DVAKVLNVKP DDITVHILFN GGGFGRRITQ
DFATEAATLS KTIGKPVKVV WTREDDTQLG PFRPMTFSAM RGALSADGKA IALQHKVISP
SIDATMNEKY DKTKADDTML EGTGDQKYEI PNLNTRYVHA DIHVPLTYWR SVTSSTLAFS
HECFIDEMAH KAGQDPLAFR MSMLTKDSDA KRVLTKLKEV SGWDNPLPAG KGRGIAQWEF
FAGLAGQVVE VSKNKTGGIT VDKVYCVIDL GTVVNPDNVK AQMEGSIAMA LTAATKDAIT
FEKGQAVQKN FDANRMLRIN EMPTVEVHIL AEGGPTIKGV GEPGLPPLAP ALANAIFAAT
GKRIRRMPFD LEKV