Gene Slin_5424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5424 
Symbol 
ID8729191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6597423 
End bp6598187 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003390190 
Protein GI284040260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACT CCGACAAGCT CATTTCGTAT TATAAAACCA TCGCCAACGA CTGTGTATTG 
GGCGTATCGC TCGACTGTGT CATCTTTGGT TTCCATGATA CCCGGCTTAA AGTGTTGCTG
CTGCGCTGGA AAGGCACGGA TGAATGGTGT TTGCCGGGCG GGTTTATCTG TAAAACAGAA
TCGGTGGACG ATGCCGCCGG TCGGGTGCTG CACGAGCGGA CGGGCCTGAA CGAGCTATTT
CTACAGCAGT TTCACTTGTT TGGCGAAGCC AACCGCTACG ACCGGGAGGA TACCTGGCAA
CGCCAGAAAA TGCCTATGCC GTTTTCCGGT TCCTGGCCCG ACCGCACCAT TTCGATGGGC
TACTACGCGC TGGTCGATTA CACAAAAGTA ACTCCCACGG CCGATTTTCT GTCCGATGTA
TGTGGCTGGT TCGACGTAGG GGAGTTGCCC TCGTTGCTGT ATGATCACTG CCGAATTATC
CATGTTGCCC TTCAGACTCT TCGTCTGCAA CTGAACTGGC AGCCTATTGG TCTAAACCTG
ATGCCCGAAA AGTTTACCAT TCCCGAACTA CAGCGGCTAT ACGAAGCCGT GCTGGGGCGA
CCGCTCGATT CGAGAAACTT TCATAAGAAA ATTACGGGCT TAAGCATCCT GACCCGGCTG
GATGAACGCC GGACGGGTAA AGCCCATAAA TCGCCCTATC TCTACCAATT CGACCTGCCC
AATTATCAAC GAGCGCTTGT CAATGGGAAT TTGATCTTTG TATAA
 
Protein sequence
MTYSDKLISY YKTIANDCVL GVSLDCVIFG FHDTRLKVLL LRWKGTDEWC LPGGFICKTE 
SVDDAAGRVL HERTGLNELF LQQFHLFGEA NRYDREDTWQ RQKMPMPFSG SWPDRTISMG
YYALVDYTKV TPTADFLSDV CGWFDVGELP SLLYDHCRII HVALQTLRLQ LNWQPIGLNL
MPEKFTIPEL QRLYEAVLGR PLDSRNFHKK ITGLSILTRL DERRTGKAHK SPYLYQFDLP
NYQRALVNGN LIFV