| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5419 |
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| Symbol | |
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| ID | 8729186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6590496 |
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| End bp | 6593804 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390185 |
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| Protein GI | 284040255 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG TAAATTCTAC CCTACTCAGG TTGATGCAAC TTACCGGTCT GCAACTCCTG
CTAGCCGTAC TTTTTATGGG TGTTTCGTGG GCAAATGATG TCTCGGCCCA GGAACTGCTC
AACCGGCGAA TAAGCCTGGT TGTCCGCGAT CAGCATATCA AGACTGTACT GCAAAGCATT
GAGAAAGCGG CTAATGTCAA ATTCTCATAT AGCCCGCAAA TTGTTCGCTC CAGACAGCTT
GTTTCGATGC GCGTGCAGAA CAGTACCTTA AAGGAGGTAC TGGAGAAGCT GCTTATCCCG
TTAAACGTCA ATTTCAGCAT CTCCGGCGAA CAGATTATTC TGGCGCGTAC GGCTGAGCAG
TCCATCAGCA TTCAGGCAGG TGAAGCCGTT GAAGAGGTCG AAGCACCCGC CGAACGGACC
ATAACCGGGG TGGTGTCCGA CGAAAAAGGC GAAGGCTTAC CCGGCGTCAG TGTAGTCGTT
AAAGGCTCGC CCCGTGGTGC CGTAACCGAC GCGTCGGGAA CGTATCGGTT AACCATCCCC
GATGGTACTC AAACGCTGGT TTTTAGCTTT GTGGGATATG CCTCGCAGGA AGTGGCCGTT
ACCAGCCAGT CAACGCTGTC GGTACAGCTC AAGCCCGACG TAAAATCCAT CAATGAGGTT
GTCGTGGTGG GGTATGGCTC GCTGAACCGC AAAGAAGTGA CCAGCGCCGT CACGCACTTG
TCCTCATCCG ACCTGCTGCG AGTGGGCAGC AACAGCCCGT TAATGGCGAT TCAGGGTAAA
GTGGCGGGTT TATCCGTGAC CAATACGGCC GCCGGCGACC CCAACTCTAC ACCCAGCATT
CAGCTTCGTG GGGTATCGTC GAGAAGCGCC GGGCTGGGGC CTTTGTTTGT GATCAACGGC
ATACCCGGCG GCAACCTGGA CAACATCAAC CAGAACGAGA TCGAATCCAT TGATGTCCTG
AAAGGCGGGG CCGCTTCGGC CATCTACGGC ACACGGGGTA GTAACGGGGT TATCGTGATC
ACCACCAAGA AGGGATCGTC GGAATCCCGC ATCTTCTACG ATGGGTACTC GTCCTTTGAT
TACATTACCA ATAGGCTGAA TTTGTTGAAT AGAGATGAAT TTCTGGCTAA TAAACGCGGT
GTCGATCTGG GTGGTAATAC CGACTGGATG AAAGCGGTAA GCCGCAATCC GGCTTTTTCA
CAGAAACATA CCCTGCAGTT TTCGGGCGGG AACGGGCAAA CCAACTACTT CACCTCGCTC
GACTACCGCA ATGCTACAGG TATTGATCTA CGGTCGGCCA AACAGGAATA CGGTGGCCGG
GTAAACATCA ACCATACCTC GGCTAACAAC CTGTATGCCA TTACCTTCAC AGCAGCACCC
CGGTATACAA AGACCAGCCT GGCCGATTAC AGTGGGTTTA ATTACGCGTT GACGCTTAAC
CCAACCCAGT CACTTTACGA CAATGCGGGA AAGTATGCGT ACATAACCAG CGGTTTTTTT
GCGAATAATC CCGTCGAACG GGCAAAAAGT GTTCTATCGG GGCAGGAAGT GAAGTACCTG
GACATCAACA GTTCATTTAA GCTGAACATC CTTCCGAATC TATCGACCCT GGTTACGCTG
GGGGAAGTGA GTTCTTCTTT CCGGAATGAA GATTTCACGC CATCGACCCT GACAACGGTG
GTCAATGGGT CAAAACGAAA CACTGCATCG CAGAGACTGG ACGAGAATGA TCAGAAAAGC
TTTGAGTGGA CGGGTAATTA TGCGCTGGAA GTCCAGAAGC ACGCCATTAA GTTACTGGGC
GGTTACTCGT ACCAATATTT TACGTCTTCC GGTTTCAACG CGTCCAACGA AAACTTCCCT
TCCGATGTAC TTACGTATAA TAGTCTGGGT ACGGGGCTCT GGAACTTACA GCAGGGCATC
AATAACGTAG GCTCTTACCG GAACAACTCC AAGCTGGCGG CTTTCTTCGG ACGCGTAAAC
TACGACTTCG ACCAGAAGTA TTACCTGTCG GCCAGTCTTC GCCGGGAGGG GTCGTCCAAG
TTTGGCTACG ATAACAAATG GGGGAATTTC CCGGCGGCAT CGGTCGGCTG GCGCATCACG
CAGGAAAAAT TTGCGCAGGG TATCCCCGTG TTAAACGAAC TGAAACTCCG TGCCGATTAT
GGCGTTACGG GCAACCAGGA CTTCGGCAAT TACCTCTCGC TGGATACGTA CGGCGGTTAC
GGCTATTATC TCTACAACAA CACATCGTAT CAGGTTTGGG GACCCAGCCA GAACACCAAC
TACAATCTTC GCTGGGAAAA AGCCATCAAC TTCAACGTGG GTGTCGACTT CGATCTGTTC
AAGAACAGCC GCTTAACGGG TAGCCTGAAC TACTACGTGC GGACCAACAA AGATTTGCTG
GGGTCCTATG CCGTACCTAA CCCGCCAAAC GTACAGGGAT CGACCTTTGC CAACGTGGGT
ACCATGCAGA ATTTGGGTCT GGAAATCCAG CTGAACGCGG CTGTGGTCAA CAAAAAGGAC
TTTAGTTATA ATTTAACTTT TGCCGGAGCG ACAAACAGCA ACAAGTTCGT TTCATTCTCC
AGCGAAGCGT TTAAAGGACA AACGTATATC GACGTATTAG GTATGCCCGC CCCTGGTAGC
CCCGGCAACG CGCAGCGCCT TCAGGAAAAC ACTCGGATCG GCAGCTTTTA TATGCTTCGG
TCGGCTGGAG TCGATGAAAC CGGCGCGTTA CTGGTCTATA AAAAGAACGG CGATGTTATC
CAGGCCAATA AAGCCAGCAA CGACGATAAA CAGTTTGTCG GAAATGGCCT GCCCAAGTTC
ACGGCGGGGC TGACCAATAC CTTCAAATAC CGGAAATGGG ATTTGAGCGT CTTTCTACGT
GGCTCGTTTG GTTACCAGAT TTTCAACACG TATGCGTTCT ATCTGGGAAC ACCGGCCACC
CAGCAGAATA TCAATACGCT TACCTCGGCT TATAACGGAA GCAAGTACTC AAAGCTGAGC
AACACTGCTA CCTATTCCTC GCTGTCCGAT TACTTTCTGG AGCCCGGTAG CTTCATCAAA
GTCGATAATA TAACGCTGAG CTACACGCAG CCTTTTACAA GCAAATTCCT GCGCTCGGCG
CGTATTTATG CAACAACCCG CAATCTGCTC ACCATCACCA AGTTCACCGG TGGCGATCCT
GACTTAGTTC AGATAAACGG CTTGTATCCG GGAATCAATC AACGTAATGA TAACGGCAAT
ATCGTTGGTA CACTGAATTA CTTCCCATCA ACGACCCAAC TCCTGCTGGG CCTTCAGGTC
ACCTTTTAA
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| Protein sequence | MKNVNSTLLR LMQLTGLQLL LAVLFMGVSW ANDVSAQELL NRRISLVVRD QHIKTVLQSI
EKAANVKFSY SPQIVRSRQL VSMRVQNSTL KEVLEKLLIP LNVNFSISGE QIILARTAEQ
SISIQAGEAV EEVEAPAERT ITGVVSDEKG EGLPGVSVVV KGSPRGAVTD ASGTYRLTIP
DGTQTLVFSF VGYASQEVAV TSQSTLSVQL KPDVKSINEV VVVGYGSLNR KEVTSAVTHL
SSSDLLRVGS NSPLMAIQGK VAGLSVTNTA AGDPNSTPSI QLRGVSSRSA GLGPLFVING
IPGGNLDNIN QNEIESIDVL KGGAASAIYG TRGSNGVIVI TTKKGSSESR IFYDGYSSFD
YITNRLNLLN RDEFLANKRG VDLGGNTDWM KAVSRNPAFS QKHTLQFSGG NGQTNYFTSL
DYRNATGIDL RSAKQEYGGR VNINHTSANN LYAITFTAAP RYTKTSLADY SGFNYALTLN
PTQSLYDNAG KYAYITSGFF ANNPVERAKS VLSGQEVKYL DINSSFKLNI LPNLSTLVTL
GEVSSSFRNE DFTPSTLTTV VNGSKRNTAS QRLDENDQKS FEWTGNYALE VQKHAIKLLG
GYSYQYFTSS GFNASNENFP SDVLTYNSLG TGLWNLQQGI NNVGSYRNNS KLAAFFGRVN
YDFDQKYYLS ASLRREGSSK FGYDNKWGNF PAASVGWRIT QEKFAQGIPV LNELKLRADY
GVTGNQDFGN YLSLDTYGGY GYYLYNNTSY QVWGPSQNTN YNLRWEKAIN FNVGVDFDLF
KNSRLTGSLN YYVRTNKDLL GSYAVPNPPN VQGSTFANVG TMQNLGLEIQ LNAAVVNKKD
FSYNLTFAGA TNSNKFVSFS SEAFKGQTYI DVLGMPAPGS PGNAQRLQEN TRIGSFYMLR
SAGVDETGAL LVYKKNGDVI QANKASNDDK QFVGNGLPKF TAGLTNTFKY RKWDLSVFLR
GSFGYQIFNT YAFYLGTPAT QQNINTLTSA YNGSKYSKLS NTATYSSLSD YFLEPGSFIK
VDNITLSYTQ PFTSKFLRSA RIYATTRNLL TITKFTGGDP DLVQINGLYP GINQRNDNGN
IVGTLNYFPS TTQLLLGLQV TF
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