Gene Slin_5417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5417 
Symbol 
ID8729184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6588714 
End bp6589292 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content50% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003390183 
Protein GI284040253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAAC AGCAGCTTTG GGCCGCTTTC CAATCGGGAA ATGAAGAGGC TTACACCCAG 
TTATACCAGT TACACATTCG GGCCATGTAT CGATACGGCA TGAGCCTGGT GGCCGTTTCA
GAAGCTTTCG TGCTGGACTG CGTGCACGAC GTCTTTACCG AATTATGGGC CAAACGAAAC
CGGTTGACCA CTCCTGATAA CATTCGCCAC TATCTGTTGA AAGCGCTTAA GAATCGAATC
ATGCATCTGC TCGAACGCAA AGAGCGGTAC AATAAATCAT TAGATGAAAC AGATTATGAT
GCACTCTGGA CAGAGCCCAA TGAGTTGGAG ATACGTGAAG AACTGGAAGC GGCCAACACA
CGTCAGCAGC GACTACAGCG GCTTATCGCC CAGTTGCCGC CCCGCCAGCA GGAAGCCCTG
AAACTGCGCT TTGTCGAAAA CATGAATTAC AACCAGATCG GCGAAGTGCT GGACGTGAAT
CAGCAGTCCG CCAAAAACCT GGTTTTCCGG GCGGTCGAAA AGCTTCGGGA CTGGATTATT
CTCCCCTTTT TAACTTTTTC CGTCTTTTTT AGGATTTAG
 
Protein sequence
MNEQQLWAAF QSGNEEAYTQ LYQLHIRAMY RYGMSLVAVS EAFVLDCVHD VFTELWAKRN 
RLTTPDNIRH YLLKALKNRI MHLLERKERY NKSLDETDYD ALWTEPNELE IREELEAANT
RQQRLQRLIA QLPPRQQEAL KLRFVENMNY NQIGEVLDVN QQSAKNLVFR AVEKLRDWII
LPFLTFSVFF RI