Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5417 |
Symbol | |
ID | 8729184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6588714 |
End bp | 6589292 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003390183 |
Protein GI | 284040253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGAAC AGCAGCTTTG GGCCGCTTTC CAATCGGGAA ATGAAGAGGC TTACACCCAG TTATACCAGT TACACATTCG GGCCATGTAT CGATACGGCA TGAGCCTGGT GGCCGTTTCA GAAGCTTTCG TGCTGGACTG CGTGCACGAC GTCTTTACCG AATTATGGGC CAAACGAAAC CGGTTGACCA CTCCTGATAA CATTCGCCAC TATCTGTTGA AAGCGCTTAA GAATCGAATC ATGCATCTGC TCGAACGCAA AGAGCGGTAC AATAAATCAT TAGATGAAAC AGATTATGAT GCACTCTGGA CAGAGCCCAA TGAGTTGGAG ATACGTGAAG AACTGGAAGC GGCCAACACA CGTCAGCAGC GACTACAGCG GCTTATCGCC CAGTTGCCGC CCCGCCAGCA GGAAGCCCTG AAACTGCGCT TTGTCGAAAA CATGAATTAC AACCAGATCG GCGAAGTGCT GGACGTGAAT CAGCAGTCCG CCAAAAACCT GGTTTTCCGG GCGGTCGAAA AGCTTCGGGA CTGGATTATT CTCCCCTTTT TAACTTTTTC CGTCTTTTTT AGGATTTAG
|
Protein sequence | MNEQQLWAAF QSGNEEAYTQ LYQLHIRAMY RYGMSLVAVS EAFVLDCVHD VFTELWAKRN RLTTPDNIRH YLLKALKNRI MHLLERKERY NKSLDETDYD ALWTEPNELE IREELEAANT RQQRLQRLIA QLPPRQQEAL KLRFVENMNY NQIGEVLDVN QQSAKNLVFR AVEKLRDWII LPFLTFSVFF RI
|
| |