| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5414 |
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| Symbol | |
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| ID | 8729181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6584142 |
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| End bp | 6585032 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003390180 |
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| Protein GI | 284040250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00395268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTAC TCAACGACCA TCAGCAGGTA CCGGTTTACA GGTTGGAGCC AGACGAGCTT
ACCGGCAACA AACAGTTCAG GGTGTATAAT TTCGAAGGCA CGCTACCCAA TCAGGCCGAT
CTGCTTGTGC CGCACCGAAA GGACCATTAT CTGCTGGTTT TTATAAGGCA GGCGGGCAGC
CGTCAGTGGA TCGACATGAC GCCCTACGTG CTTAAAGACA ATACGTTCTA CTTTACCGGA
CCCGATCAGA TCATCGTAAA GGAAGGGTTC AACCAGTTGT GGAGTACGGG TATTGCCTTT
ACGAAGGAGT TCCTGTCCTT TCAGGAAAAC GCGGCTTTAA GCAAACTGCC ACTCATTCAG
AATCCTCATA ACGGTCATGA GTTGCTGTTG ACGGAGGCTG ATGTGATGTT TGTTGAGGAT
ATGCTGGCAA AGATCAATGC GGAGTATCAA CAGCCTAACG AATGGCAGCA ACGCATGCTG
ACCGCCTACC TGACGGTATT GCTTACGTAT CTGAGCCGAC TGTATACCGA GCAGTTCGAA
AGCAAACCAG CTTCGACAGA CAACCTGTTG TTGAAGAAAT ATCAGGCAAA AATCAATGAA
CACTTTCGCG AACGACATCA GGTAAGTGAC TATGCGTCTT TATTGAATGT ATCGGCCGGG
TATCTCAGTG AGGTAGTAAA AGCCCAAAGC GGCAAACCGG CCATTACGCA CATCCATGAA
CGGTTGGTAC TCGAAGCCCG GCGACTGCTA TTTCACACGC CACAGTCACT GAAGGAGATC
GCCTTTGATC TCGGTTTTTC GGATGCTTCC TACTTCAATC GCTTTTTCAA ACGAGAAACG
GAACTTACCC CCGCCGAGTA CCGGGCCAGT ATCCGTGAAA TGTACCAGTA A
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| Protein sequence | MQLLNDHQQV PVYRLEPDEL TGNKQFRVYN FEGTLPNQAD LLVPHRKDHY LLVFIRQAGS
RQWIDMTPYV LKDNTFYFTG PDQIIVKEGF NQLWSTGIAF TKEFLSFQEN AALSKLPLIQ
NPHNGHELLL TEADVMFVED MLAKINAEYQ QPNEWQQRML TAYLTVLLTY LSRLYTEQFE
SKPASTDNLL LKKYQAKINE HFRERHQVSD YASLLNVSAG YLSEVVKAQS GKPAITHIHE
RLVLEARRLL FHTPQSLKEI AFDLGFSDAS YFNRFFKRET ELTPAEYRAS IREMYQ
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