Gene Slin_5407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5407 
Symbol 
ID8729174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6577910 
End bp6578263 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content50% 
IMG OID 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_003390173 
Protein GI284040243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.347398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAC TCACAATTCA TAAATCCGAA ATGACCTGGC AACCCGCTTG CCCAACCAGC 
CACATTCCCG AAGATGGCGG TGCCTGCGTA CTTCTCAATG GTCGGCAGAT CGCTATTTTC
AACTTTTCCC GCCGGGGCGA GTGGTACGCG ACGGCAAATG AATGCCCGCA TCGGCAGCAA
ATGGCCTTAT CGCGGGGGAT GATCGGGAGT CAGGGCGAGG AGCCTAAAGT CGCCTGTCCG
TTCCACAAAA AGACATTTTC GCTCAAATCC GGCGAATGCC TTAACGACGA TGGCTACAAA
ATCGCCACAT TTCCTATTAA AATAGTAGAT AACATGGTGT ATATTGGAGT ATAA
 
Protein sequence
METLTIHKSE MTWQPACPTS HIPEDGGACV LLNGRQIAIF NFSRRGEWYA TANECPHRQQ 
MALSRGMIGS QGEEPKVACP FHKKTFSLKS GECLNDDGYK IATFPIKIVD NMVYIGV