| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5406 |
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| Symbol | |
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| ID | 8729173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6575221 |
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| End bp | 6577734 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003390172 |
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| Protein GI | 284040242 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA ACAAAAACAG GCGTGTCGTC GTCATTGGCA ACGGCATGGT AGGCTACAAG
TTCTGCGAGA AATTAGTAGC CAAAGAAAAA AATGACCAGC GATTTACACT GACGGTTTTT
GGGGAAGAAC CGCGTGTAGC CTATGATCGG GTCCATTTAA GCGCCTATTT CGATGGCAAA
ACCGCCGACG ATCTGACGCT GGCCCCTCAG AGCTGGTACG CCGACAACGG CATCACGCTC
TACCTCACCG ACCCGGTCGT CAACATCGAC CGGGAGCGTA AAGAGGTTCG GTCGCACCAC
GGCGTTGTAG TGCCTTATGA CTACCTGGTA CTAGCCACCG GCTCGGGCGC GTTTGTGCCC
CCTGTGGCGG GCGTCGAAAA AGACGGCGTC TTTGTGTATC GCACCATCGA AGACCTCGAC
CTTATTCAGT CGTATGCTCG GAAAGCCCGC AAGGGAGCCG TATTAGGCGG TGGTTTGCTG
GGTCTCGAAG CGGCCAAAGC CCTGCTAGAT CTGGGTCTCG ACGAAGCGCA CGTGGTGGAA
TTTGCCCCGC GTCTGATGCC CCGACAGATC GACGATGCGG GTTCCGGTAT TCTTCAGCAT
CAGCTGGAAT CGCTCGGTCT GAACATTCAC CTGTCGAAAA GCACGCAGGA GATCACCGGC
GACGAAGCCA TTACAGGCAT GCAGTTTGCC GATGGCTCGC ATCTGGCCGT CGATATGCTG
GTTATTTCGG CCGGTATCCG GCCACGCGAC GAGCTGGCAA AATCCGCTGG TCTGGACACG
CACCCACGGG GCGGTATTCT GGTCGACAAC TTCCTGCAAA CGTCCGATTC GTCCATTTTC
GCCATTGGCG AATGTGCAGT GGTGCACCAC ATGATTTACG GGCTGGTGGC CCCCGGCTAC
GAAATGGCTG AGGTGGTCGC GTCGCGTTTG ATCGGCGAGG AAAAGGAATT CAAGCCCTAC
GACATGTCCA CGAAGCTCAA GCTGATTGGT ACGGACGTAG GCTCTTTCGG CGATCCGTTT
GCATCGGACT GCAAAACGAT TGTCTACGAA AATAAGGCCA AGGGCGTTTA TAAGCGGGTT
AACATATCGG TCGATGGCAA AGAACTGCTG GGCGGTATTC TGGTGGGCGA TGCCGAGCAG
TATAATATGC TGCTCCAAAC CTGCAAGAAC AAGACCATCC TCCCACCCGA TCCCGAAGAC
CTGATTCTCG GCTCTCGTGG GGGTGAGGAA GCCGGGGCCG GTGTGATGAG CCTCCCCGAC
GATGCGCTGA TCTGTTCCTG CGAAGCGATC ACGAAAGCCA TGCTCTGCCA TGAAATTGGC
GAGAATGGTC ACACCACCGT CGATGCGCTC AAGAAAGCCA CCAGAGCCTG CACCGGCTGC
GGAGGCTGTA CCCCAATGGT GAAAGACATT ATTCAGGGCG TACTCAAGCA AAAAGGCGTT
TACGTCCGCA ACATTCTCTG CGAACACTTC GACTTCACCC GGCAGGAACT GCTCGATCTT
GTCAAGATCA ACAGCCTGAA AACCTTCGAC GCCGTACTGG ATAAAGTCGG CAAGGGCGAT
GGCTGCGAAG TCTGTAAACC GGCAGTCGCG TCGATTCTGG CGAGCCTCTG GAACGAGAAT
ATTCTGGAGC AGGGCCGCGC CACTATTCAG GATTCCAACG ACCGCTTTCT GGCGAATATT
CAGAAAGGAG GTACGTATTC GGTCGTGCCC CGAATTCCAG GTGGCGAAAT CACGCCCGAT
AAGCTGATCG TGATTGGGCA GGTGGCCAAA AAATACGGGT TGTACACCAA AATTACGGGT
GGCCAGCGGA TCGACTTGTT CGGTGCGCAC GTTGGTGACT TACCCGTAAT TTGGGAAGAA
CTGATAGCCG CCGGTTTTGA AAGTGGTCAC GCCTACGGTA AATCATTACG TACGGTGAAA
AGCTGCGTGG GCAGTACCTG GTGCCGCTTT GGCGTGCAGG ATTCGGTGTC GTTTGCCATC
GAAGTTGAAG AACGCTACAA AGGCATTCGG TCGCCACACA AGCTCAAGTC GGGCGTGTCG
GGCTGTATCC GGGAGTGTGC CGAAGCCCAG AGCAAAGACT TCGGTATCAT CGCCACCGAG
AAAGGCTGGA ACTTATACGT AGGCGGCAAC GGCGGATCCA AGCCCCAGCA CGCCATACTG
CTGGCGTCGG ATGTGGACAA GGAAACCTGT ATCCGCTACA TCGACCGGTT CCTGATGTTC
TACATCAAAA CGGCCGACCC GCTCACCCGT ACAGCCACCT GGCTAAACAA GATGGACGGC
GGCATGAACT ACCTCCGGGC CGTGGTGGTA GATGATGTCC TGAACATTGC CGACGAACTG
GAACGCGAAA TGCAGCTTCT TGTCGACACC TTCAAATGCG AGTGGAAAGA AGCGGTCGAA
AACCCGGCGC TCCGTGCACG ATTCGCCCAC TTCGTCAACG CCCCCGAGCA GAAAGACCCA
ACCGTTCAGT TCGACGCCCT ACGCGACCAG AAACGGGCGA AAGAGTGGGC GTAG
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| Protein sequence | MNTNKNRRVV VIGNGMVGYK FCEKLVAKEK NDQRFTLTVF GEEPRVAYDR VHLSAYFDGK
TADDLTLAPQ SWYADNGITL YLTDPVVNID RERKEVRSHH GVVVPYDYLV LATGSGAFVP
PVAGVEKDGV FVYRTIEDLD LIQSYARKAR KGAVLGGGLL GLEAAKALLD LGLDEAHVVE
FAPRLMPRQI DDAGSGILQH QLESLGLNIH LSKSTQEITG DEAITGMQFA DGSHLAVDML
VISAGIRPRD ELAKSAGLDT HPRGGILVDN FLQTSDSSIF AIGECAVVHH MIYGLVAPGY
EMAEVVASRL IGEEKEFKPY DMSTKLKLIG TDVGSFGDPF ASDCKTIVYE NKAKGVYKRV
NISVDGKELL GGILVGDAEQ YNMLLQTCKN KTILPPDPED LILGSRGGEE AGAGVMSLPD
DALICSCEAI TKAMLCHEIG ENGHTTVDAL KKATRACTGC GGCTPMVKDI IQGVLKQKGV
YVRNILCEHF DFTRQELLDL VKINSLKTFD AVLDKVGKGD GCEVCKPAVA SILASLWNEN
ILEQGRATIQ DSNDRFLANI QKGGTYSVVP RIPGGEITPD KLIVIGQVAK KYGLYTKITG
GQRIDLFGAH VGDLPVIWEE LIAAGFESGH AYGKSLRTVK SCVGSTWCRF GVQDSVSFAI
EVEERYKGIR SPHKLKSGVS GCIRECAEAQ SKDFGIIATE KGWNLYVGGN GGSKPQHAIL
LASDVDKETC IRYIDRFLMF YIKTADPLTR TATWLNKMDG GMNYLRAVVV DDVLNIADEL
EREMQLLVDT FKCEWKEAVE NPALRARFAH FVNAPEQKDP TVQFDALRDQ KRAKEWA
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