| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5395 |
|---|
| Symbol | |
|---|
| ID | 8729161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6559714 |
|---|
| End bp | 6560328 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Superoxide dismutase |
|---|
| Protein accession | YP_003390161 |
|---|
| Protein GI | 284040231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG TATTAGACCC ACTTCCTTAC CCAAGCGATT CGCTCGAACC GAATATCGAC
AAGCAAACCA TGGAAATTCA CCACGGAAAG CACCACAACG CGTACGTGAC GAATCTCAAT
AACGCCATTG CAGGCACCGA AATGGAGAAT AAATCCATTG AAGACCTCCT GGCTTCAGTA
AGTTCAGCGC CCGTTGCGGT TCGTAATAAT GGAGGTGGTC ACTACAACCA CACCTTGTTC
TGGAATACTA TCTCTGGAAG CGGTGGTGGT CAGCCAACCG GTACACTGGC CGAAGCTATC
GACTCGAAAT TCGGCTCGTT CGACGCCTTT AAAGAAGAAT TCACCAAGGC AGCAACCACC
CGTTTTGGTT CGGGCTGGGC GTGGCTGATC GTTACTCCCG AAGGCGAACT AGCTATCACG
TCATCGCCAA ACCAGGATAA CCCACTCATG GACATTGCCG AAGTAAAAGG TTTCCCTATC
ATCGGTCTCG ACGTTTGGGA GCACGCTTAC TACCTGAAAT ACCAAAACCG CCGACCCGAT
TACATTGCGG CTTACTTCAA TGTCGTTGAC TGGGCTGCCG CCGAAAAACG GTACCAGCAG
GGCAAACAGG CGTAA
|
|---|
| Protein sequence | MAFVLDPLPY PSDSLEPNID KQTMEIHHGK HHNAYVTNLN NAIAGTEMEN KSIEDLLASV
SSAPVAVRNN GGGHYNHTLF WNTISGSGGG QPTGTLAEAI DSKFGSFDAF KEEFTKAATT
RFGSGWAWLI VTPEGELAIT SSPNQDNPLM DIAEVKGFPI IGLDVWEHAY YLKYQNRRPD
YIAAYFNVVD WAAAEKRYQQ GKQA
|
|---|
| |