| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5393 |
|---|
| Symbol | |
|---|
| ID | 8729159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6555206 |
|---|
| End bp | 6559117 |
|---|
| Gene Length | 3912 bp |
|---|
| Protein Length | 1303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003390159 |
|---|
| Protein GI | 284040229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.56459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAC GTATATTATA CTCCTGTTTA CTTACCTGGT TATGCATTGC CGGGCTAACT
AACCAAAGTC TGGCACAGAC AATAACCAGT GTCACTTTTC CTGCAGCAAC TGTCTGCCCG
GGTAGCGATG TTACCGTTTC GTACACCATA AGTGGTACGT TCGCTGCTGG CAATACGTTT
ACAGCCTTTT TGTCTAACTC GGCAGGCACG TCATTCCCGA CTAACGTGGG GTCTGTTTCC
AGTGTAGTTG CCGGGACAAT TACGGCCAGA ATTCCGGCGG GAACGGCTAA CGGATCAGGC
TATCTCATTC GTGTTGTTGC GAGTAACCCG AACGTTAATG CAACAAGCGG CAGCCAGCTT
ACGGTTTCGG CGCCATCGGC TCCAGGCGTA TCGCCCCCTT CAGCCTACTG CCAGGGCGAT
GCGGCACAAG CACTTATTGC GACGGCCACT TCGCCAGCTA CATTAAGATG GTATGGCACA
GATCAGACGG GGGGTACGGC GTCAACGGTG GCAACTATCC CCGGCACAAC GTCTACCGGT
AGCACAACCT ACTACGTGAG CCAGGTATTG AGTGGCTGCG AAGGCCCACG CGCCGGTATA
GTTGTTACGG TAAAAGGTAA ACCCAGCGCA CCAGGTGTTA GTGGTGTAAA TTACTGTGTT
GGCCAGACAG CCGGTTCGCT AACGGCCTCG GTAGCAGCAG GCGGTTCGCT GAACTGGTAT
GGTACCAGCG CATCGAGTGG GTCAGCGTCA TCAGTAGCTC CTATCCCTTC CACAGGATCA
GCGGGCACAA CAACATACTA TGTCAGTCAA ACAGTAGACG GCTGCGAAGG CCCACGTGCT
GGTCTGGCAG TAACGGTAAA TGGTATACCT TCTGCCCCGA CAACTACCAC ACCCGCTCCT
TACTGCGAAG GCGCTACGGC CCTGGCTCTG TCGGCAACAC CGTCCGCAGG CGGAACCCTA
CGATGGTATG GTACTGAAGC AACAGGCGGC ACATCAGTAA CCAATGCTAC CACACCCAAC
ACAACGATCG TTGGCACCAC CAACTACTAC GTCAGTCAAA CAGTAAACAA CTGTGAGAGT
CCAAGGGCCG CCATTCCGGT AGTAGTGCGG GCAAGCCCTT CAGCTCCGGC AACTACACCT
GCTCCTGATT ACTGTCAGAA CCAGACGGCG AGTGCACTGG TCGCAACACC AGCTGCAGGG
GCAACCTTGA ACTGGTATGG AACGGCCGCC AGCGGTGGTG CAGCCTCGGC AATAGCGTCT
GTACCCGCAA CAACCCAGGC CGGAACATTT ACCTATTATG TTAGTCAGAC GGCAAACGGC
TGCGAAGGGC CACGCGCCAG TATCGTTGTT ACGGTAAAGG GTACGCCCAG TGCACCAACC
GTTTCCAGTC CGCTTATTGC CTGCCAAAAT CGGACTGGTT ATGCGCTGAC AGCCACTCCT
TCTGGCGGAG GTACCCTAAA CTGGTATGGT ACGTTGGCTA CGGGTGGTAC CTCTACTGCT
ACTGCTCCTA CGCTGTCAAC AGTATCATTA GGATCGACAA ACTATTATGT CAGCCAGTCC
GTAAACGGTT GTGAAGGGGC GCGTGCCCTC ATCACCGTTA CGGTCAATGC TGTGCCAGCT
GCTCCGGTCG CCACGGCTCC CTCTCCTTAT TGCGAGGGCA CTACGGCCTT ACCCCTAACC
GCTACAGGGC AAAATCTGAA ATGGTATGGC ACCGCAGCAA CGGGTGGAAC CGGTTCCAGC
AGCCCTACAA TTCCCACTAC TGCTCTATTC GGGTCAACGA ATTATTTCGT CAGTCAAACC
GTAAGCGGCT GCGAGAGCGA GCGGACGAGC ATTCTGGTCG TGGTAAAGGA TACACCGGCT
GCTCCTGGTG TATCGGCTGT TGAGTTTTGT CAGGAAGCAG CACTACCGGT ACTGACGGCT
ACCCCAGTTG CTACGGCTAC AATCAATTGG TACGGTACCT TATCAGTCGG AGGTGTAGCC
TCGACAACAG CACCAGTGCC AAGCAAAACA GTGGTTGGCA CTACCGTTTA TTACGTCAGC
CAGACACTGG ATGGTTGTGA AGGGCCCCGT GCTTCGTTGA GCGTACGCGT CAAGGCGACA
CCCAGTGCCC CTGGCGTTGC TGCCGTCAGC TACTGCAATA ACAGCCAGGC ACAGCCCCTG
ACCGCTACCG CTGCGGGGCC GACACTCAAA TGGTTTGATG CCGCCGATAA GTTACTTACC
GAGGCTCCAA CGCCCAATAC AGGCAGCGTA GGCGACCAGA CGTTTAAAGT ATCACAGGTA
TCGAGCGAAA ACTGCGAGAG TCTCAAAGCT ACCATAACCG TTACGATCAA ACCATTACCT
GCTCCTCCCG GTGTTAAGCC ACTTACTTAC TGCCAGAAGC AGATAGACCA GATCCCACAA
AATGTAACAC CGCTGGAGGC TACGGGATCG AACCTAAAAT GGACGCTCAG CGACGGAAAT
CCGTTCTCCG GCTCCCCTAC CCCTTCTATT GATAAAGCCG GTACTCAGAT TTTCCTGGTC
ACGCAAACGG TAAACGGCTG CACGAGTACA GCGGCACGGC TGGAAGTATC GGTGCTAACT
CCTGCAATTC CTACCGTGCT AAAGCCAGTA GTTACCTATT GTATCAATGA CCGGGCGGTG
CCGCTGGAAG CCAGTACGAA CGAAACAGGT GCCCAGCTAC GGTGGGTAGA TCCGGCGGGT
AACGTCACCG TCAACGCACC CACTCCCCCA ACCCTGAATA AAAACGTGCA GGAGGGTGGC
GATGCATTCT ATGTTTATCA GATCGCTAAC TACGGATGCG CCAGTGCCCG GGCCACCGTT
CGGGTCATTG TCAACACCCC TCCAACGCTG GCTCTGGCAG CGCCGGTTGC ATCCGTAAAT
CTTGGTCAGC GAGCACCTTT ACAACTTAAA TTTACGGGTG CCGGGCCCTA CAGCTACAGC
CTAACCGAAG GTTACTCGGG CCAGACTAGG GGCGATACAA CCATTTCCGT ATTACCACGT
AGCAATACGA CGTATCAGAT CGTCAGTGTT AGTAATGCAT GTGGCGTAGG GCTACCCGGA
ACAACGGCTA CGATTACCGT TCGGGTACCA ACGGTATCGA CAAGTTCGTT TGCCACAACG
ACGTTGTGCG CTGGCACATC AATATCGGTG CCCTTCACGA CAACCGGCGA GTTTAATACC
GGTAACGCAT TTCGTATCGA AGTGGCCAGT GTGGCCGACA CATCGAAAAA ATTCACGTTC
CAGACCACGG CTGCCGGTTC ACCCGTTACG GGAACAATCC CGATCTCACT GGCAAGCGGG
CAGTACTACG TGCGGATAAA AGCCGATAAT CCGGAAATTG GCATTATAGG CTCCAATAGC
CCTACCCTGC TGACGGTACG TTCCTTACCA ACCGCTACGC TGACCGGAAC ACAGAATATC
TATGAAGGCT CTCCGGCTAA CTTGACCATC ACATTTGGAG GAGATGGCCC CTGGGACGCT
ATCTATGCCG ATAGCCTCCG CACGTACCCA ATCACAGCAA GCACTAGTCC GTTAATTGTG
GAGGCTCGTC CAGCCCGAAC AACCGCTTAT CGGCTGACCA GCGTAACCAA CAGTTGCGGC
AGCGGCCCGG TTTCGGGTAC CGCCACAATC TCTGTGCTGC CGTTGCTGGG CGTGGATGAT
AACTCGCTCG ACCCACTGGT GAAGGCGTAT CCGGTACCAA CCGTCACCAA GCTGATTGTT
GAACTCAATC TGCCCCTGAC CCGTGATCCG GCCATTTTAT CCCTGACCGA TCAACGTGGA
AAGCCCGTTC TGCAGCACAC AACCCGCGGC CAGATGAATG AGCTGGATTT AAGCGGACAG
CCAAGTGGGT TGTACATCTT GCGTATCCGG GTTGGAGATC GGGAGACAGC CCGAAAAGTA
CTGAAGCAGT AG
|
|---|
| Protein sequence | MKGRILYSCL LTWLCIAGLT NQSLAQTITS VTFPAATVCP GSDVTVSYTI SGTFAAGNTF
TAFLSNSAGT SFPTNVGSVS SVVAGTITAR IPAGTANGSG YLIRVVASNP NVNATSGSQL
TVSAPSAPGV SPPSAYCQGD AAQALIATAT SPATLRWYGT DQTGGTASTV ATIPGTTSTG
STTYYVSQVL SGCEGPRAGI VVTVKGKPSA PGVSGVNYCV GQTAGSLTAS VAAGGSLNWY
GTSASSGSAS SVAPIPSTGS AGTTTYYVSQ TVDGCEGPRA GLAVTVNGIP SAPTTTTPAP
YCEGATALAL SATPSAGGTL RWYGTEATGG TSVTNATTPN TTIVGTTNYY VSQTVNNCES
PRAAIPVVVR ASPSAPATTP APDYCQNQTA SALVATPAAG ATLNWYGTAA SGGAASAIAS
VPATTQAGTF TYYVSQTANG CEGPRASIVV TVKGTPSAPT VSSPLIACQN RTGYALTATP
SGGGTLNWYG TLATGGTSTA TAPTLSTVSL GSTNYYVSQS VNGCEGARAL ITVTVNAVPA
APVATAPSPY CEGTTALPLT ATGQNLKWYG TAATGGTGSS SPTIPTTALF GSTNYFVSQT
VSGCESERTS ILVVVKDTPA APGVSAVEFC QEAALPVLTA TPVATATINW YGTLSVGGVA
STTAPVPSKT VVGTTVYYVS QTLDGCEGPR ASLSVRVKAT PSAPGVAAVS YCNNSQAQPL
TATAAGPTLK WFDAADKLLT EAPTPNTGSV GDQTFKVSQV SSENCESLKA TITVTIKPLP
APPGVKPLTY CQKQIDQIPQ NVTPLEATGS NLKWTLSDGN PFSGSPTPSI DKAGTQIFLV
TQTVNGCTST AARLEVSVLT PAIPTVLKPV VTYCINDRAV PLEASTNETG AQLRWVDPAG
NVTVNAPTPP TLNKNVQEGG DAFYVYQIAN YGCASARATV RVIVNTPPTL ALAAPVASVN
LGQRAPLQLK FTGAGPYSYS LTEGYSGQTR GDTTISVLPR SNTTYQIVSV SNACGVGLPG
TTATITVRVP TVSTSSFATT TLCAGTSISV PFTTTGEFNT GNAFRIEVAS VADTSKKFTF
QTTAAGSPVT GTIPISLASG QYYVRIKADN PEIGIIGSNS PTLLTVRSLP TATLTGTQNI
YEGSPANLTI TFGGDGPWDA IYADSLRTYP ITASTSPLIV EARPARTTAY RLTSVTNSCG
SGPVSGTATI SVLPLLGVDD NSLDPLVKAY PVPTVTKLIV ELNLPLTRDP AILSLTDQRG
KPVLQHTTRG QMNELDLSGQ PSGLYILRIR VGDRETARKV LKQ
|
|---|
| |