Gene Slin_5362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5362 
Symbol 
ID8729127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6523469 
End bp6524110 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390129 
Protein GI284040199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.141407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CTACGGTACT CCTAATCGGG TTACTTTTTA GCACTTATGC TGTCTTTGCG 
CAGGTGCGCC TTGGCCTGAC AGCAGGCTTT CAACTAGCTA GTGAACAGTA TAAGATCGGC
GGCTTGACTC TAAAAACCAA CAATTACCCA GGCTATATGG GTGGTCTTGT AGTTGATGCT
ATTATGACTG AGAAACTATC CATCAGATCT CAGGCATTGT ATTCAGTAAA AGGGGCAAAA
CTTGATTTGG GTAGTTTATC CGGGGGCTTG TCAATTGGCT CAGTGAGTAC TATTTTCAAC
TATATTGAAG TACCTGTTCA GTTAACTTAT TCCCTCGATG CAGGACCTGG TTGGGTTGTG
TTGGGAGCAG GACCTTATGT TGCCTATGCC CTGAATGCAA AATCAACCGG TACGAATTTG
GGCCAGCAAC TAAACGAAGC CGTAGAATTT AGTTCTAAAG ACGGAGATGC CAAACGGCTG
GATTATGGGC TACGCCTGTC TGTTGGCTAT GAACTCCCTT CAGGCTTGAT GGTTTCTGGT
TATTATTCAC CCGGGTTAGC TAATATAGTT AGTGGCCCTT CATCTGCTAT TAAAAATACA
GCTATGGGCC TCTCACTTGG CTTTATGTTT GGCGGTAATT AA
 
Protein sequence
MKKSTVLLIG LLFSTYAVFA QVRLGLTAGF QLASEQYKIG GLTLKTNNYP GYMGGLVVDA 
IMTEKLSIRS QALYSVKGAK LDLGSLSGGL SIGSVSTIFN YIEVPVQLTY SLDAGPGWVV
LGAGPYVAYA LNAKSTGTNL GQQLNEAVEF SSKDGDAKRL DYGLRLSVGY ELPSGLMVSG
YYSPGLANIV SGPSSAIKNT AMGLSLGFMF GGN