Gene Slin_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5351 
Symbol 
ID8729116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6514877 
End bp6516097 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003390119 
Protein GI284040189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC AATCTATACA ATACGAATAT GCACCGGGGC ATTTCAAGGC ATCGGAGCCG 
AGTGTGTACC GGCCCGATAT GCTTGCCGAA GGCGAGATGA TCCTGAACAT GGGACCGCAG
CACCCGTCGA CGCACGGCGT TTTGCGGTTC GAAGTGGTGA CGGATGGCGA AATCATCGTT
GATGTGGTGC CGCATCTCGG TTACCTGCAC CGCTGTTTCG AGAAACACGC CCAACACCTC
CCGTTCAATC AAACGATTCC TTTTGTTGAC CGGCTGGATT ATCTGGCAGC CATGAATTCT
GAACATGCGT TTGTGATGGG TGTGGAGCGT ATGCTGGGTA TAGAGAACGA TATTCCCAAA
CGTACTGAAT ACATACGGGT GCTGGTGGCC GAACTGAACC GGATTGCCGC GCACTTTGTG
GGAGTCGGTA CCTATGCGCT CGATATTGGC GCCTACACAC CCTTTCTCTG GCTCATGCGC
GACCGGGAGC ACATCCAGCG GATGCTCGAA TGGGTGAGTG GTGCCCGGAT GCTGTACAAC
TACATCTGGG TAGGGGGCTT GTTCTACGAT CTGCCCGTAG GATTTGAAGA GCGATGCCGG
GAGTTTGTCA ACTACCTTAA GCCAAAGCTG GTCGAGTTGC AGCAACTGGT CATCGAAAAC
GAAATTTTTG TCAAGAGAAC GGCCAATGTG GGCGTGCTGC CTTTAGCGGT AGCTATCGAC
TACGGCTGTA CCGGCCCCAT GCTGCGTGGC TCGGGTCTGC GCTACGACCT CCGCCGGGTC
GATGGGTATT CGGTTTACCC CGAACTGGAT TTTGACATCC CGATTGGCGA AGGCAAAGTA
GGTACCGTGG GCGACTGCTG GGATCGGAAC AATGTTCGGG TGCTGGAATG CCACGAGTCC
ATCCGCATCA TCGAGCAGTG CCTCGATAAA CTGATGGGTG ACTACAAACG CACCCGCGAC
TACGACCCGC AGGCGGTTGT CCCCAAGAAA ATTCGGCCCA AAGCGATGGA TTTTTACGCT
CGTGCCGAAA GTTCAAAAGG GGAGTTGGGC TTCTTTTTCC GAACCGATGG AAAATCCGAT
ATTCCCGTTC GCTGTAAAGC CCGCTCGTGC TGTTTCCACA ACCTGTCGGT CATCAGTGAA
ATCAGCAAAG GAGCCATGCT CGCCGACCTG GTCGCCATCA TCGGGTCAAT TGATGTGGTG
ATGGGGGAAG TGGATCGGTA A
 
Protein sequence
MTTQSIQYEY APGHFKASEP SVYRPDMLAE GEMILNMGPQ HPSTHGVLRF EVVTDGEIIV 
DVVPHLGYLH RCFEKHAQHL PFNQTIPFVD RLDYLAAMNS EHAFVMGVER MLGIENDIPK
RTEYIRVLVA ELNRIAAHFV GVGTYALDIG AYTPFLWLMR DREHIQRMLE WVSGARMLYN
YIWVGGLFYD LPVGFEERCR EFVNYLKPKL VELQQLVIEN EIFVKRTANV GVLPLAVAID
YGCTGPMLRG SGLRYDLRRV DGYSVYPELD FDIPIGEGKV GTVGDCWDRN NVRVLECHES
IRIIEQCLDK LMGDYKRTRD YDPQAVVPKK IRPKAMDFYA RAESSKGELG FFFRTDGKSD
IPVRCKARSC CFHNLSVISE ISKGAMLADL VAIIGSIDVV MGEVDR