Gene Slin_5350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5350 
Symbol 
ID8729115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6514274 
End bp6514828 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003390118 
Protein GI284040188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACGA TCAAAGACAA AACATTTGTC CCGTTTATTC CCGCCAATGC CATTCAGGAA 
CGCATTCAGG AATTAGCCAG CCAAATTAAT CAGGAATACG CCGACAAACA GCCGCTCATT
GTGGTCGTTC TGAACGGCGC TTTTTTGTTT GCCGCCGATC TGGCCAAACA CCTCACAATT
CCCTGCGAAA TTACGTTCAT TCGGGTAGCC TCCTACAGCG CCACAGCGTC CAGTGGTCAA
CTGAAGCAGA TTCTGGGCCT GAACGAATCC ATCGCTGGCC GGGATTTGAT CGTGGTCGAA
GACATTGTCG ATACCGGCCT TACCATTCAT GAGGTTTGTG CGCAGCTTCA GGCAATGGGC
CCCACGTCAA TCGCTATTGC TACCCTATTA TTCAAACCCA GTGCCCTGAA AGAAAAGCTC
GACCTGCACT ACGTCGGCTT CGAAATCGAA AACCGCTTCG TGCTGGGCTA CGGCCTCGAT
TACGACGGCC TGGGCCGGAA TACGACGGAG ATATTTGTTC TTTTTGAGGA GATAGGAGTT
GGGAGCGAGA AGTGA
 
Protein sequence
MLTIKDKTFV PFIPANAIQE RIQELASQIN QEYADKQPLI VVVLNGAFLF AADLAKHLTI 
PCEITFIRVA SYSATASSGQ LKQILGLNES IAGRDLIVVE DIVDTGLTIH EVCAQLQAMG
PTSIAIATLL FKPSALKEKL DLHYVGFEIE NRFVLGYGLD YDGLGRNTTE IFVLFEEIGV
GSEK