Gene Slin_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5336 
Symbol 
ID8729101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6499033 
End bp6500169 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content44% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003390104 
Protein GI284040174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.850487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTA CACTACGCGA AAAGCCAATT AATGACGGTA AGATCAGCCT ATACTTAGAC 
TTCTATCCGG CTATATCTCA CCCTGAAACC GGAAAAGACA CACGGCGTGA ATTTTTAGGG
CTGTACCTTT TCGATAAACC ACGTACTGAA CTGGACAGGC AGCACAATAA GGCAACCAAG
CTACTCGCTC AGAATATTTG CGCTACACGA CAATTGGAAG TACAGGCAGG TAATTACGGA
TTCCTGAAAA AGAAAGTAGT AGCCGTTGAC TTTCTGGCCT ATTTTAAGAA ACAGGCAGAT
ATAGAAAAAG CAAGGGACAA AGGGAGCAGA AACAACTGGA ATAGTGCTTA TCTGCATTTG
TACAATTTCA CAACTGGAAA GTTGACCGTT GATGAGGTTA CTGCCGATTT CTGTAAATCA
TTCCGTGATT ACCTGACAAC GGCAAAACCT CTAAACGTTA CTAAGTCAGC AAAGAAAGCC
ATTGCCCACA ACTCAGCTAA AGGATACTTT GTCATTTTTG GTACAGCTCT TAATCGAGCC
GTTGATGATA AGTTATTTAC TATAAATCCG AACGATACTG TAAAGGGGTT AACCCGAAAA
GAAACCCAAC GGGAATTTCT GACTTTGGCC GAACTGCAAA GCCTGGCTAA GACAGAATGT
GATTTGCCTT ACCTAAAACG TGCTGCCCTG TTTTCTGCCC TCACTGGTTT ACGTTACAGC
GATGTAGCTA AACTAACCTG GTCTGAGGTG TACGAAGATG TGAACGGCTC CTACATTCGA
TTTATGCAGC AAAAAACGGA AGGTGTAGAA ACTTTGCCCC TCAACGAAAC AGCCCGTATC
CTATTAGCTG AACGATCCGA GGGCGTAGTA TTTCCCGAGT TACTTTATTC AAGTTGGCAG
AATCAGAAAC TAAGCGAGTG GGCTCATAGG TCCGGTATCA AACGGCGCAT TACTTTTCAT
GCCTTTCGAC ACACATTCGC AACGCTGCAA CTAATGGAAG GGACCGACCT CTACACAATA
AGTAAGCTAT TAGGGCACCG CAACATAACC ACTACTCAGA TTTACGCTAA GATCGTTGAC
ACGCAAAAGC GGGCCGCTGT AAATCGGCTG TCTATCGAAA TTACTGACAT GAATTAA
 
Protein sequence
MKVTLREKPI NDGKISLYLD FYPAISHPET GKDTRREFLG LYLFDKPRTE LDRQHNKATK 
LLAQNICATR QLEVQAGNYG FLKKKVVAVD FLAYFKKQAD IEKARDKGSR NNWNSAYLHL
YNFTTGKLTV DEVTADFCKS FRDYLTTAKP LNVTKSAKKA IAHNSAKGYF VIFGTALNRA
VDDKLFTINP NDTVKGLTRK ETQREFLTLA ELQSLAKTEC DLPYLKRAAL FSALTGLRYS
DVAKLTWSEV YEDVNGSYIR FMQQKTEGVE TLPLNETARI LLAERSEGVV FPELLYSSWQ
NQKLSEWAHR SGIKRRITFH AFRHTFATLQ LMEGTDLYTI SKLLGHRNIT TTQIYAKIVD
TQKRAAVNRL SIEITDMN