Gene Slin_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5319 
Symbol 
ID8729084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6484017 
End bp6484940 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content40% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390087 
Protein GI284040157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.368951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.689489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTG ACGATTTCAA TCCTTTAATT GGATCTGCAA TACATGTAGA TCCCAAACGC 
CGATACTGGC TTGTTCGCAC TGAAGGAGGT GATTTGTATG ATCACTTTCG TCACGATAGC
CTTATAGCCA TCGGGTTTAA TCAAATCAGC CTTGAAAGCA TAGATGAGTC TATCAAACGA
GGGGGGGATA AGCCTGTTAA CTTTTTGGCC GAAATTATTA GAGCAAAAAT GCCGGATTAT
AGACTGCCAC GTTATGCTGC TGGTCAATTG TTAAGATTTG TAAAGGAAAT TAAGCGTAAT
GATATTGTGC TTATACCTTC GTTTGGTTCC CAAAAAATTA CCATCGGCGA GGTTTTGGAA
ACACCAATTA CAATCGACAA TGATGCATAT AACGTCATCC AGCCTAAAGA CGGGCCAATG
GTGAGCAATT ATACAAAGCG TCGAAAAATT AAGTGGCTTA AGGAAGTTAG TCGAAATCGA
CTTGACCCTG TTCTTTATAA ATTACTATAT TCTCACCATA TCGTATCTGA AGCCACACCT
TACGCAAATC CCATAGATAA CCTTCTTAAT GATTTCTATG TAAAGGGTAA GGAAACACAC
ATTGTCTTGG AAGTTACTAC AAAACATGAT ATTGCGGCTA GGACTTTGTT TGATATGGGT
TCATCATTAC TTGATTTGGT CGATCAGTTT TGTAAAGACA ACGAACTAGG GATTGATACC
TCTGATGTAG ATATAAAACT TTCTTTACGT TCTCCTGGTA AGATCGAACT AACAACGAAG
AAAGCTGGAA TTGCAGCTTT ATTGGGTATC ATAATCGTAG GAATAGTTGG TGGTGGCTTT
AATATGTATT CCGGACAAAG TGACCCAGGC GTTTCGGAGC AAACTGACCC ACCCCGCCTG
TGGGTAGGAA CCGCTCAAAG TTAG
 
Protein sequence
MNVDDFNPLI GSAIHVDPKR RYWLVRTEGG DLYDHFRHDS LIAIGFNQIS LESIDESIKR 
GGDKPVNFLA EIIRAKMPDY RLPRYAAGQL LRFVKEIKRN DIVLIPSFGS QKITIGEVLE
TPITIDNDAY NVIQPKDGPM VSNYTKRRKI KWLKEVSRNR LDPVLYKLLY SHHIVSEATP
YANPIDNLLN DFYVKGKETH IVLEVTTKHD IAARTLFDMG SSLLDLVDQF CKDNELGIDT
SDVDIKLSLR SPGKIELTTK KAGIAALLGI IIVGIVGGGF NMYSGQSDPG VSEQTDPPRL
WVGTAQS