Gene Slin_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5317 
Symbol 
ID8729082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6480887 
End bp6481981 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content39% 
IMG OID 
Productprotein of unknown function DUF450 
Protein accessionYP_003390085 
Protein GI284040155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0984182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA AAGACCAAAT TAAACAATTG GCTGACCGAG TTTCTCGCTT AAAAGATTCT 
ATTTTAACTG AAGAGGCTAC CAAGAACGCA TTAATCATGC CTTTTCTGAA TACCCTAGGT
TATGATGTTT TTAACCCTTT TGAAGTAGTG CCAGAGTTTA TTTCAGATAT TGGCACTAAG
AAGGGTGAAA AAGTAGATTA CGCTATTATG CGTGAAACAA ACGGAACACT TGAGCCTAGT
ATACTGATGG AGTGTAAGCA TTGGAAACAA GCTTTAACGC TGCATGATAA TCAACTACTT
CGCTACTTTC ACGTTACAAA AGCCCGTTTT GGCATCCTTA CAAACGGTAT CATTTATCGT
TTCTATACAG ACCTGGTAGC TCCCAATAAG ATGGATGAAC ACCCTTTCCT TGAAATTGAC
ATGCTTGATT TAAAGGAAAG TCAGATTGAG GAGTTAAAGA AGTTCAGTAA ACCTTATTTC
GATGTTGATC AAATCTTAAG TACGGCCAGT GAACTTAAGT ACACAAGCGC CCTTAAAGTC
ATAATGGCCC ATGAATTTGC CAACCCCTCC GAATACTTTG TCAAGTACTT TGCGAAAAGC
GTTTATGAAG GTACGTTAAC GGCTAAGATG GTTGACTACT TTACGGGTAT AGTAAAGAAA
TCAATTGCGC AGACAATTTC TGAGCAAATT ACAGGAAGGC TAAAAACCGC ACTAGTCCAA
GAAGAACAGG CAATCCCTAC AATGGTCGAA CAGCCAGCAG CAGTTGAGGA GAAGTCGGGT
CCTATTGTTA TTACAACTGC TGAGGAGTTA GAAGGATTTT ATATTGTTAG ATCAATTTTG
CGCCCTTACC TAGAATACCA TCGCATTGTT CATCGGGACG CTCAATCTTA CTTTGCTATC
CTTCTTGATG ATAACAACCG TAAGCCTATT TGTAGATTAC ATTTTAACGG ACTAAAGAAG
TACATAGGTA TTATTGATGC AGACAAAAAA GAAACCCGGC TTGAGTTGCA AGGCTTAGAC
GACATCTATA ATTACAGCGA AGCACTTCAA CAAACAGTAC TTGCTTATAC AAAAGCAGCT
GTAAAGGTTG AATAA
 
Protein sequence
MDFKDQIKQL ADRVSRLKDS ILTEEATKNA LIMPFLNTLG YDVFNPFEVV PEFISDIGTK 
KGEKVDYAIM RETNGTLEPS ILMECKHWKQ ALTLHDNQLL RYFHVTKARF GILTNGIIYR
FYTDLVAPNK MDEHPFLEID MLDLKESQIE ELKKFSKPYF DVDQILSTAS ELKYTSALKV
IMAHEFANPS EYFVKYFAKS VYEGTLTAKM VDYFTGIVKK SIAQTISEQI TGRLKTALVQ
EEQAIPTMVE QPAAVEEKSG PIVITTAEEL EGFYIVRSIL RPYLEYHRIV HRDAQSYFAI
LLDDNNRKPI CRLHFNGLKK YIGIIDADKK ETRLELQGLD DIYNYSEALQ QTVLAYTKAA
VKVE