Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5309 |
Symbol | |
ID | 8729074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6473352 |
End bp | 6474983 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003390077 |
Protein GI | 284040147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.700694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.749654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGAC CTCTCACCCA CCTGGCTTTT ATTCTTCACT TTACATTCTT CATTATCCAT TCCTTATCGG CCCAGGTAGA AAAGTCTCCG CCCCGGCACG AAGGCGATGG CCCCTTTGGT AAACTCATCA TCCGGGGTGT TACGCTCGTT AATAGTACCG GTGCCCCACC CGTTGGGCCG ATGGATATTG TGGTCGAGAA AAACCGGATT ACGCAAATCA GGCAGGTAGG CTATCCCGGC GTGCCGATCG ACCCGAAAGG CCGTCCGCAG GCATCGCCCG GCGACAAAGA GCTGAACTGC GAAGGTATGT ATCTGATGCC CGGCTTCATT GATATGCACG GCCACATTGG CGGCCAGGCA CAGGGTGCCA GTGCCGAGTA TGTCTTTAAA CTCTGGCTCG GGCACGGCAT TACCACCATC CGCGACCCAT CGTGCGGCAA TGGCCTCGAC TGGGTACTTG AGCATCGCGC CAAAAGTGAC CGGAACGAAA TTACCGCTCC CCGCATTAAA GCGTACACCG TTTTCGGGCA GGGGGCCAAA GAACCCATCA GCACCGTAGA GCAAGCCCGC GCCTGGGTAC AGCAAAACGC AAAAAAAGGG GCCGATGGCA TCAAATTTTT TGGTGCAGAA CCTAATATAT TCCGGGCAGC CCTGGAAGAA AACAAGAAGC TGGGATTGCG TTCGGCCTGC CACCACGCGC AGCTGGAAGT AGCCCGAATG AATGCACTGG CAACGGCCAA AGCCGGTTTG ACCTCCCTCG AACACTGGTA CGGTCTGCCC GAAGCCCTGT TCGACGACAA GACGGTTCAG AACTACCCCG CCAATTACAA CTACAACAAC GAACAGAACC GCTTTGAAGA AGCCGGGAAC CTCTGGCAAC AGGCCGCCAA ACCCGGCACC GACCGCTGGA ATAAGGTGAT GGACGAACTC ATTGGGCTGG ATTTCACCCT CGACCCGACT TTCAACATTT ACGAAGCCAA CCGGGAGCTG ATGCTGGCCC GGCGCGCTGA GTGGCACGAC GACTACACGA TGCCAAGCCT GTGGCGTTTC TACGGCCCGA GCCGGATTTC GCACGGGTCG TACTGGCATT CGTGGGGTAC GGAGCAGGAG GTGGCCTGGA AGAAAAACTA CCAGCTTTGG ATGGCGTTTA TCAACGAATA CAAAAACCGG GGCGGGCGCG TAACGGCGGG TTCGGATTCG GGCTTTATTT ACCAGCTTTA CGGCTTTGCC TACATCCGCG AACTCGAACT CCTCCGCGAA GCCGGTTTCC ACCCACTCGA AGTAATCCGG GCGGCCACCC TGAAAGGTGC CGAAGCCCTC GGCATGGCCG ACCAGATCGG CTCGGTTGAA GTCGGCAAAC TCGCCGATTT TGTCATTGTC GACCAGAATC CGCTCGCCAA CCTGAAGGTA CTATATGGTA CGGGGGCTAT TCACCTGAAC GACAAAAACG AAGTAGAGCG CGTTGGCGGA GTTACCTACA CCGTAAAAGA CGGCGTGGTT TATGACGCGA AGAAGCTACT GGCCGATGTT CGGAAACTGG TAGCCGATGC TAAGCAAAAA GAGAATTTCG AGATCACGCA GCCCGGCGTT CCGGCCAAAG CGGGCAAAGT ATCGGGTGGT GCGAAGAACT AA
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Protein sequence | MIRPLTHLAF ILHFTFFIIH SLSAQVEKSP PRHEGDGPFG KLIIRGVTLV NSTGAPPVGP MDIVVEKNRI TQIRQVGYPG VPIDPKGRPQ ASPGDKELNC EGMYLMPGFI DMHGHIGGQA QGASAEYVFK LWLGHGITTI RDPSCGNGLD WVLEHRAKSD RNEITAPRIK AYTVFGQGAK EPISTVEQAR AWVQQNAKKG ADGIKFFGAE PNIFRAALEE NKKLGLRSAC HHAQLEVARM NALATAKAGL TSLEHWYGLP EALFDDKTVQ NYPANYNYNN EQNRFEEAGN LWQQAAKPGT DRWNKVMDEL IGLDFTLDPT FNIYEANREL MLARRAEWHD DYTMPSLWRF YGPSRISHGS YWHSWGTEQE VAWKKNYQLW MAFINEYKNR GGRVTAGSDS GFIYQLYGFA YIRELELLRE AGFHPLEVIR AATLKGAEAL GMADQIGSVE VGKLADFVIV DQNPLANLKV LYGTGAIHLN DKNEVERVGG VTYTVKDGVV YDAKKLLADV RKLVADAKQK ENFEITQPGV PAKAGKVSGG AKN
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