Gene Slin_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5306 
Symbol 
ID8729071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6470554 
End bp6471441 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content53% 
IMG OID 
Productmetallophosphoesterase 
Protein accessionYP_003390074 
Protein GI284040144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.270172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGG AAGAGGATAA ACGGGAAATT CTGTTTTTAA GTGATACTCA GGCGCCCATG 
TGGGTGGAAC GACTGGTGCT GCGGACGCAT CAGAATACCA AGGCAACAAC GACCATTTTC
AATGAGATTA TCCGGCTCAA ACCGGCTGTT TTGTATTGGC TGGGCGACAT TGTTTCGCTG
GGCTACCGGA ATAATAAATG GCGCATTATT GACCAGTTTC TGGCAAGCTG CACGGCGGTC
GGTACGGCGG TGTACGCTAT CATGGGCAAC CACGATGTAA TGGGGCGCCC CCGGAAAGGA
GCCAAAAACT TCCAGAAACG TTTCCCGGAG CATATTTCAA CCGGTTATGT TAAAGTAACG
GACAGCGTTG CAGTTGTGAT GCTCAATTCA AATTTCAGCA TTCTCTCCGT CGCCGATCTG
GTGAAGCAGC AGACCTGGTA CGAACAGACG CTCAAAGACC TCGATGAAGA CCCGGCCGTA
AAAGTCGTTG TCGTTACCTG TCATCATGCG CCTTACTCCA ACAGCAAACT GGTTGGCTCG
TCCAAGCTGG TTCAGCAGCG GTTTGTTCCA GCCTACACAC GGTCGCAGAA GGGACGTCTG
TTCATTACGG GGCATTCGCA CGCCTTCGAG CGCTACGAGT TTGAGGGCAA AACGTTCCTG
GTCATTGGCG GGGGTGGTGG CCTGCGGCAA CCGCTGAACG TATCGCCCAC CCGATTGCCC
GACCTGGCAA CGGACTACAA ACCCCTCTTT CATTACCTGT CGGTCAGGCG CGATGGCGAT
GGTCTTTCAC TCACGTCGTA TTGCCTGAAG AAAGACTTTT CCGGTTTTTC GGTAGGCTAC
CAGTTTGAGA TACCGGGGCA GGAAGTTCTG GCGGAGAAGC CGGATTGA
 
Protein sequence
MNQEEDKREI LFLSDTQAPM WVERLVLRTH QNTKATTTIF NEIIRLKPAV LYWLGDIVSL 
GYRNNKWRII DQFLASCTAV GTAVYAIMGN HDVMGRPRKG AKNFQKRFPE HISTGYVKVT
DSVAVVMLNS NFSILSVADL VKQQTWYEQT LKDLDEDPAV KVVVVTCHHA PYSNSKLVGS
SKLVQQRFVP AYTRSQKGRL FITGHSHAFE RYEFEGKTFL VIGGGGGLRQ PLNVSPTRLP
DLATDYKPLF HYLSVRRDGD GLSLTSYCLK KDFSGFSVGY QFEIPGQEVL AEKPD