Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5306 |
Symbol | |
ID | 8729071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6470554 |
End bp | 6471441 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | metallophosphoesterase |
Protein accession | YP_003390074 |
Protein GI | 284040144 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.270172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCAGG AAGAGGATAA ACGGGAAATT CTGTTTTTAA GTGATACTCA GGCGCCCATG TGGGTGGAAC GACTGGTGCT GCGGACGCAT CAGAATACCA AGGCAACAAC GACCATTTTC AATGAGATTA TCCGGCTCAA ACCGGCTGTT TTGTATTGGC TGGGCGACAT TGTTTCGCTG GGCTACCGGA ATAATAAATG GCGCATTATT GACCAGTTTC TGGCAAGCTG CACGGCGGTC GGTACGGCGG TGTACGCTAT CATGGGCAAC CACGATGTAA TGGGGCGCCC CCGGAAAGGA GCCAAAAACT TCCAGAAACG TTTCCCGGAG CATATTTCAA CCGGTTATGT TAAAGTAACG GACAGCGTTG CAGTTGTGAT GCTCAATTCA AATTTCAGCA TTCTCTCCGT CGCCGATCTG GTGAAGCAGC AGACCTGGTA CGAACAGACG CTCAAAGACC TCGATGAAGA CCCGGCCGTA AAAGTCGTTG TCGTTACCTG TCATCATGCG CCTTACTCCA ACAGCAAACT GGTTGGCTCG TCCAAGCTGG TTCAGCAGCG GTTTGTTCCA GCCTACACAC GGTCGCAGAA GGGACGTCTG TTCATTACGG GGCATTCGCA CGCCTTCGAG CGCTACGAGT TTGAGGGCAA AACGTTCCTG GTCATTGGCG GGGGTGGTGG CCTGCGGCAA CCGCTGAACG TATCGCCCAC CCGATTGCCC GACCTGGCAA CGGACTACAA ACCCCTCTTT CATTACCTGT CGGTCAGGCG CGATGGCGAT GGTCTTTCAC TCACGTCGTA TTGCCTGAAG AAAGACTTTT CCGGTTTTTC GGTAGGCTAC CAGTTTGAGA TACCGGGGCA GGAAGTTCTG GCGGAGAAGC CGGATTGA
|
Protein sequence | MNQEEDKREI LFLSDTQAPM WVERLVLRTH QNTKATTTIF NEIIRLKPAV LYWLGDIVSL GYRNNKWRII DQFLASCTAV GTAVYAIMGN HDVMGRPRKG AKNFQKRFPE HISTGYVKVT DSVAVVMLNS NFSILSVADL VKQQTWYEQT LKDLDEDPAV KVVVVTCHHA PYSNSKLVGS SKLVQQRFVP AYTRSQKGRL FITGHSHAFE RYEFEGKTFL VIGGGGGLRQ PLNVSPTRLP DLATDYKPLF HYLSVRRDGD GLSLTSYCLK KDFSGFSVGY QFEIPGQEVL AEKPD
|
| |