| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5300 |
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| Symbol | |
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| ID | 8729065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6463134 |
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| End bp | 6466445 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003390068 |
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| Protein GI | 284040138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.236434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTC AATTAACTGG TGCTGTGCGC GACCGCGCTA CCAACACCTA TTTATCGACA
GGACTGACCG TTCAGGCCGT TCAACAGGAC GCTCCCCAGA CCGTAGTAGG CTCAACGCTG
ACGGATGAGC GGGGAGATTA TCAGTTGCTG CTCGACCTGC CCCGATCCGT CCGGCCGGTT
GCAGTAACCA TGCGGGTGTT GCGTGCGCCG AATGCCCGCC AACCCCTCGC CGATACGACC
GTTACCGTCA ATCCCGCCTT TCCAACTCAG GTCGCCGATT TGTTCGTCGA TGCCCGGCAG
GCGTATACCT GGGTACGTCA ACGGCATCAG GGCCGGGCCA ATGTTGATCA GGCGCGTTTG
CGGATTCGTC GTGCCGATGG GTTCGACATT CCCGAGCTGG CCGACTTCTA CCCGAGCACA
CAGCCCGGCG AGCCGACATT ACCGGAACAG CTACAGTTCA TTACGTTACC CAGTGGCAGC
CGGATTATCG GGCTGACGGT GGAGCCGGGT GAGCCAGTGC GGTTGCCCGA CCGGGTAAAC
CCCAGGCCAG TGCCGACGGT TCTGCTGGAC GTTCCCGATA CCAACCCGGT GCTTCGGGCC
AGCGTCCTGG CCGCCAGTCG TCAGCGGGCT ACGTTGTCGA CCCGTATTCT GCGCGGATTA
CCTGCACCAA CGGAACTGGC GCTGATTCAG CGTACCGAAG AGGTGAACCG TACGCTTTCG
GTAGCCATCC GGGTCCGGCC CATGCAATAC GATCCGCGAC AACAGCAATA CCTCCTCTAC
CCCAATCTCA GCTACACCCT GGAGGTAGAA CAGCCCGACA TACCCCTGCC TGCCACGCCG
GTTACCGAAC TGCGAAAACT CAATTTCCCC CTGGGATATC AGTCGGTACT GACTCAGTTT
AACCACGGAA TCACCAATGT CAATCTGGGT GATTTTCGCA TCCCTCCGGG AGGAATTCCC
TTTGTCGTTA CGACCGCGCC TTACCTGATT ATTACGGACG ACCGGCGGTG GACGTTCCAG
AATGGAAAGC CCGTTGCAGG CAATGCGCTT CCGCTGGATT CGGCGGGGAA AACGGCTACC
AGTCACTTTC TGCGGCTGGC CGAGTGGAAA GCCAAACGGG GCATCGACGC CAAAGTGGTA
ACGGTATCCG AAATTGTGCA GGGAGGCAGT TCGACAGGCC TGAAATGGGG CGACTTCACG
GACTGCGGTA ACGGACTGAA AGCGCGTGAT CTGGCCGAAC TAATCCGAAA CTTCGTAAAG
TATGCGTACA AAAGCTGGAA AACCCGGTAT CTGCTCATCG GGGGCGATAC CGATATAGTC
CCCATGCGCA ACATGGTTAG CTACGTGAGC GATAAAGGGA ATTATGGCTG GGACTTTGTT
TATGTGTCAG ATCCGGTGCC GCCCATTCGC AAGTGTTTTA AAATTCCCGG CCAGTCGATT
GCCAAACTTC GCCACGATTC GAGCACGGGG GCCTTTGCAC TCCGAACAGT GCCCGACCCC
CAGAACCCGG GCAAAACAAA ACAGGTATTC GACGATACGC AACCCTTCCG AACGCTCTGC
AACGCCACAT CGGGCAAGAT CATCTCGTTT AATCTGAATG CCTCAGCCCA GCAGCCCGGC
TGGTATTTTA CAAAAGAGTC GGAGTTTATG GATGCCAAGA AAACGACGGG CTTTACGCGT
TTGGCCAAAC CAGAAACGGA CGACCTGGGC AAAATTTACA TGATCCTGGA AGGGCCCGAC
GCCAGTGTTT CCAGTACCTA CGGCTTTTAC TGGCTGGGCA ACGACCGGAA CATCCCCACC
GATTTCTATT ACGCCAGCGT GGATGGTTCC TGCTATTCGG TGCTGGGCCG GTATGATTTC
GACCCGCTGG CGTCGGGCCG GTATGGTATG TTTGCGCTTA ACCCAGTTAA TAAAGAAGAA
GAACCCCTGC TGAACAGCTA CAAGACAACG CAGGATATAT GGGTTGGCCG GGCACCCGTT
ACCAGTGGTG CCGAAGCCGC TGCCTTCGTC GATAAAGTGA TAGCCTATGA AGGATTGACC
ATCAATAGCC CAGTGGCCGA TCAGTCCTTG AGAACAATGG TGTTTGCCGC CGATTATTTT
GGTGGCGTTG TGGGCTACTG GCCGGACAGC AGCGGGAAGG AAAACCCCGA AAAAGAAGGG
CTGTTCAGCG TGACGAAGAA AACGAGTCCA GCCGCCAACA GCATTCGTAT GCGCCTGCGC
TTGTTACCGG CTACGAGTGC AACGCTGGAT AGCTCGTTTT CGCCTAACTT CAACCTGAAA
GCCGTTTACG ATGACAAAGA CCTGCTGATT CCGTACAACC CGATCAGCCA GATCGAATCG
CCCCGGTTTT ATTTCATGGA CGAGACGTTC AGCCAGAAGG TGGTTGACAA AGCGACCAAC
TTCATTGAAA TCACCGGCTT TACCACGACG ACTCAGCCAC CACAGATTCA GACGGATGCC
AAAGGGCTCG AATTAGCGGC CTTCGAAGCG GAAACAAAGC GCAAACTGAT GCAGGAATTA
TTTCCTGATT TTTCTACGAT CCGCCGGTTC TACGCCGATT ATACCGAGAC ATTAGCAGAG
CCGCAGCCCG CCCTGCCCCT GCGCACCCAG AGTTTGCTGA AGGGCATCAG CCAGGGAACC
CACTTTTTGA GTTTAACGGG ACATGGCGCT CCCTGGGGAA CCTGCTGGAT TGACACCAAC
TCCATCGACG CCCTGACCAA TACCTCGGGC TATTTTATCG CCTATGGCGA TGCCTGCCAT
ACCAGCGCAC CCGAAGAAGG GACCAAAACC TTCGGGGAGA AGATGGTCAC GATGGCCAGC
AAAGGCGCGG TTGCCTACGT GGGTCACACC AACATGGGCT ACACGGGCGT TACGTATTTG
TACGAACAGT TTTTCTGGGT AATGGCCGCT TTTGGTGCTC CTTTAGGGCA GGCAGCCGGG
CTCCGGCAGT CGATAGATGG TTCTAAAGGG ATGTGGTGCC TGTTTACCCA GGCCCTGTAT
GGCGACCCGG CAATGGTCCT CTGGCAGACT GTTCCCCAAA AGCTCATCGT CACGCATCCG
GCTACGGCAA CGAAAGGCAC GACCCTTATC GTAACCGTGA CGAATGACAA ACAAACGCCA
ATGGCCAATC AGACCGTCAC GCTGATTGGT GGCTGGAATA ACGACCGTGC GGTGCTTAGT
AAGCTTAAAA AGACGGATAA GCAGGGCCAG GCTTCCTTCA CGATTCCGGC GGGGTTAGCG
CTCAAGGATG TAGCCATAAC GGTTACCGGT ACAGCGAACA AGCCTTACCA GGCAACAGTG
CCGGTTAGCT GA
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| Protein sequence | MQIQLTGAVR DRATNTYLST GLTVQAVQQD APQTVVGSTL TDERGDYQLL LDLPRSVRPV
AVTMRVLRAP NARQPLADTT VTVNPAFPTQ VADLFVDARQ AYTWVRQRHQ GRANVDQARL
RIRRADGFDI PELADFYPST QPGEPTLPEQ LQFITLPSGS RIIGLTVEPG EPVRLPDRVN
PRPVPTVLLD VPDTNPVLRA SVLAASRQRA TLSTRILRGL PAPTELALIQ RTEEVNRTLS
VAIRVRPMQY DPRQQQYLLY PNLSYTLEVE QPDIPLPATP VTELRKLNFP LGYQSVLTQF
NHGITNVNLG DFRIPPGGIP FVVTTAPYLI ITDDRRWTFQ NGKPVAGNAL PLDSAGKTAT
SHFLRLAEWK AKRGIDAKVV TVSEIVQGGS STGLKWGDFT DCGNGLKARD LAELIRNFVK
YAYKSWKTRY LLIGGDTDIV PMRNMVSYVS DKGNYGWDFV YVSDPVPPIR KCFKIPGQSI
AKLRHDSSTG AFALRTVPDP QNPGKTKQVF DDTQPFRTLC NATSGKIISF NLNASAQQPG
WYFTKESEFM DAKKTTGFTR LAKPETDDLG KIYMILEGPD ASVSSTYGFY WLGNDRNIPT
DFYYASVDGS CYSVLGRYDF DPLASGRYGM FALNPVNKEE EPLLNSYKTT QDIWVGRAPV
TSGAEAAAFV DKVIAYEGLT INSPVADQSL RTMVFAADYF GGVVGYWPDS SGKENPEKEG
LFSVTKKTSP AANSIRMRLR LLPATSATLD SSFSPNFNLK AVYDDKDLLI PYNPISQIES
PRFYFMDETF SQKVVDKATN FIEITGFTTT TQPPQIQTDA KGLELAAFEA ETKRKLMQEL
FPDFSTIRRF YADYTETLAE PQPALPLRTQ SLLKGISQGT HFLSLTGHGA PWGTCWIDTN
SIDALTNTSG YFIAYGDACH TSAPEEGTKT FGEKMVTMAS KGAVAYVGHT NMGYTGVTYL
YEQFFWVMAA FGAPLGQAAG LRQSIDGSKG MWCLFTQALY GDPAMVLWQT VPQKLIVTHP
ATATKGTTLI VTVTNDKQTP MANQTVTLIG GWNNDRAVLS KLKKTDKQGQ ASFTIPAGLA
LKDVAITVTG TANKPYQATV PVS
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