| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5296 |
|---|
| Symbol | |
|---|
| ID | 8729061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6458410 |
|---|
| End bp | 6459273 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Catalase |
|---|
| Protein accession | YP_003390064 |
|---|
| Protein GI | 284040134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0565655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.201236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTATC ACGATAAGAA ATTACAATTT AAAGTACGGG TCGATAAACC CAATCCACAA
TTTGCACGGG CCTTACAGCA GGCCATTGGC GGCATCGAAG GCGAAATCCG GGTATGCCTG
CAATACTTGT TTCAGTCCTG GAATTCACGT GGTCCCCAGC GTTACCGGGA CATGCTGCTG
GATACCGGCA CCGAAGAAAT AGCCCACATC GAAATGCTGG CTACGGCGGT GTCGCTCAAC
CTGGAAGGAG CATCGAGCGG GGTGATCGAA AGCATCGTTG GTGGCGATAC GCTGATGGAA
AAAATTGTGG GCGGTGGCGA TCCCCGTCAT TTCTTGTCGG GTGGACTGGG TGCCATGGCG
GCCGATGCCA ACGGCGTACC CTTCAACGGG TCGTGGGTAG TAAGCTCGGG CAACATTGCC
GCCGATATGT ACGCTAACGT TATGGCGGAG GCCACCGGCC GTACATTGGC CACGCGCCTG
TATGAACTGA CCGACGATGC GGGTATGAAA GACATGCTGG CGTTCCTGAT TGCCCGCGAC
ACCATGCACC AGCAGCAATG GCTGGCCGTT CTGGAAGAGT TGGGCAACGG CGACATCCGC
AATGTGCTGC CCATCCCGAA CAGCTTCCCG CAGAGCCAGG AGCATCAGGA GTTCAGCTAC
GCGTTTGTTA ACACGAATAT CGACCCGGAT GAGCCTTCGG CGGGCCTGAA CCGTCGCTGG
ACGCAGGGCC CTTCGCTCGA CGGCCGCAGC GAGTTCCGCG AAATGAAAGC CCAGCCCATT
GGTGGTGAGC CCAAGTTAGC GCCCCCCATC CCCGAAGGCC ACGCGCAGGT AGAGCAGATC
GAAAAAGCCA ACTCGAAAAG CTAG
|
|---|
| Protein sequence | MFYHDKKLQF KVRVDKPNPQ FARALQQAIG GIEGEIRVCL QYLFQSWNSR GPQRYRDMLL
DTGTEEIAHI EMLATAVSLN LEGASSGVIE SIVGGDTLME KIVGGGDPRH FLSGGLGAMA
ADANGVPFNG SWVVSSGNIA ADMYANVMAE ATGRTLATRL YELTDDAGMK DMLAFLIARD
TMHQQQWLAV LEELGNGDIR NVLPIPNSFP QSQEHQEFSY AFVNTNIDPD EPSAGLNRRW
TQGPSLDGRS EFREMKAQPI GGEPKLAPPI PEGHAQVEQI EKANSKS
|
|---|
| |