Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5294 |
Symbol | |
ID | 8729059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6457085 |
End bp | 6457825 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
Protein accession | YP_003390062 |
Protein GI | 284040132 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0229456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.187838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATAA CACTCAAAGT CTGGCGACAG AAGAACACGA GTACCCCGGG CAAATTAGTC GAATACAAAC TGGCTAATAT CGACCCGGAC ATGTCGTTTC TGGAAATGTT CGACATTCTG AACGGCGAAT TAACCCATAA GGGCGAGCAG ATCATTGCCT TTGACCACGA TTGTCGGGAA GGTATCTGTG GCTCCTGCGC CATGTACGTG AACGGCCGGG CGCATGGCCC TCAGACCGGT GCTGCCGTTT GTCAGCTTTA CATGCGCAGC TTCAACGATG GCGACACCAT CATTGTGGAG CCCTGGCGTT CGCGGGGGTT TCCCGTCATC AAAGACCTCT CTACCGACCG CTCGGCCTTC GACCGGATCG TACAGGCGGG GGGTTATATT TCCGTCAACA CGGGAGCGGC TCCGGAAGCC AACGAGATTC TGGTGTCGCA TGAAATACAG GAAACTACCA TGGATGCTGC CGCCTGCATT GCCTGCGGGG CGTGCGTAGC GGCCTGTAAA AACGCATCGG CCATGCTGTT TGTGAGTGCG CAGGTCTCAC GCTTTGCGCT GCTGCCCCAG GGACAATCCG AACGCCGTAC ACGGGCCGAA CGCATGGTGG CCCAGATGGA TTCGGAAGGG TTTGGAGCAT GCTCCTTTAC CGGCGCCTGT GCCGTGGAGT GCCCGGCATC CGTATCGCTG GAGAACATAG CCCGCCTGAA TCGGGAATAC CTCGGCGCCA AAATCCGCTG A
|
Protein sequence | MNITLKVWRQ KNTSTPGKLV EYKLANIDPD MSFLEMFDIL NGELTHKGEQ IIAFDHDCRE GICGSCAMYV NGRAHGPQTG AAVCQLYMRS FNDGDTIIVE PWRSRGFPVI KDLSTDRSAF DRIVQAGGYI SVNTGAAPEA NEILVSHEIQ ETTMDAAACI ACGACVAACK NASAMLFVSA QVSRFALLPQ GQSERRTRAE RMVAQMDSEG FGACSFTGAC AVECPASVSL ENIARLNREY LGAKIR
|
| |