Gene Slin_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5294 
Symbol 
ID8729059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6457085 
End bp6457825 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_003390062 
Protein GI284040132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0229456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.187838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAA CACTCAAAGT CTGGCGACAG AAGAACACGA GTACCCCGGG CAAATTAGTC 
GAATACAAAC TGGCTAATAT CGACCCGGAC ATGTCGTTTC TGGAAATGTT CGACATTCTG
AACGGCGAAT TAACCCATAA GGGCGAGCAG ATCATTGCCT TTGACCACGA TTGTCGGGAA
GGTATCTGTG GCTCCTGCGC CATGTACGTG AACGGCCGGG CGCATGGCCC TCAGACCGGT
GCTGCCGTTT GTCAGCTTTA CATGCGCAGC TTCAACGATG GCGACACCAT CATTGTGGAG
CCCTGGCGTT CGCGGGGGTT TCCCGTCATC AAAGACCTCT CTACCGACCG CTCGGCCTTC
GACCGGATCG TACAGGCGGG GGGTTATATT TCCGTCAACA CGGGAGCGGC TCCGGAAGCC
AACGAGATTC TGGTGTCGCA TGAAATACAG GAAACTACCA TGGATGCTGC CGCCTGCATT
GCCTGCGGGG CGTGCGTAGC GGCCTGTAAA AACGCATCGG CCATGCTGTT TGTGAGTGCG
CAGGTCTCAC GCTTTGCGCT GCTGCCCCAG GGACAATCCG AACGCCGTAC ACGGGCCGAA
CGCATGGTGG CCCAGATGGA TTCGGAAGGG TTTGGAGCAT GCTCCTTTAC CGGCGCCTGT
GCCGTGGAGT GCCCGGCATC CGTATCGCTG GAGAACATAG CCCGCCTGAA TCGGGAATAC
CTCGGCGCCA AAATCCGCTG A
 
Protein sequence
MNITLKVWRQ KNTSTPGKLV EYKLANIDPD MSFLEMFDIL NGELTHKGEQ IIAFDHDCRE 
GICGSCAMYV NGRAHGPQTG AAVCQLYMRS FNDGDTIIVE PWRSRGFPVI KDLSTDRSAF
DRIVQAGGYI SVNTGAAPEA NEILVSHEIQ ETTMDAAACI ACGACVAACK NASAMLFVSA
QVSRFALLPQ GQSERRTRAE RMVAQMDSEG FGACSFTGAC AVECPASVSL ENIARLNREY
LGAKIR