Gene Slin_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5290 
Symbol 
ID8729055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6453958 
End bp6454311 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content54% 
IMG OID 
ProductProteinase inhibitor I42, chagasin 
Protein accessionYP_003390058 
Protein GI284040128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.440506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG GGCTACTACT GCATATCGTA TTGAGTTGCA CTAATCTGAT GCCGCCGGAA 
GACTCTGTCA GACGGGTCAG ACAGGGCGAA GTATTTACCA TCTCGCTACC ATCGTCCATC
GGCACGGGCT ACACCTGGCA GCTGGCCAGA CCCGCCGACA GCACGCACCT CACATTCATG
TCAAAGCGCT ACATAGCCGC GAATGACCTC GACGGCGGAC CGGGAACAGA CCAGTTTACC
TTCCGGGCGG TGAAAAAAGG GCGGGTTCGA TTACGCTTCC AGTACGTACG CCCTTGGGAG
AAAACGCTGC CAAAAGACAC TCGCTACCAG ACATTTTCCA TTACCATTTT TTAA
 
Protein sequence
MNLGLLLHIV LSCTNLMPPE DSVRRVRQGE VFTISLPSSI GTGYTWQLAR PADSTHLTFM 
SKRYIAANDL DGGPGTDQFT FRAVKKGRVR LRFQYVRPWE KTLPKDTRYQ TFSITIF