| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5281 |
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| Symbol | |
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| ID | 8729046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6438671 |
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| End bp | 6440599 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_003390049 |
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| Protein GI | 284040119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.64117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACC TCATCGATAG CGGCCAACGC TCGCTGGGCG TCACGTTTCC CAACGAGCAC
GAAGCCAGCA TACAGCTATG GGCACCCCTG GCCAAGTATG TAGCCATAAA AATATACGGG
CATCCGACAG CCCTTCCTTT GACGTGCGAA GAACTGGGCT ACTGGCATTT GACAACCACC
CAGCTTAAAC CCGGCGATCT GTACACGTTT AAGCTCGACG GGCAGGAAGA ATATCCCGAT
CCGGTATCCC TTTGCCAGCC GCAGGGCGTA CACGGCCCCT CGCAGGCGGT CGATACAGGA
AGCTTCTCGT GGACCGATCA GGACTGGCAA AATCCGGCGC TGGACAGCTA CGTGCTTTAC
GAACTGCATA CCGGCACGTT TACCGAAGAA GGCACCTTTC AGTCGCTGGA GAGCAAGCTG
GATTACCTGA AAGCGCTGGG CGTAACGGCC ATTGAGATCA TGCCAGTAGC GCAGTTTTCC
GATTCGCGCA ACTGGGGTTA CGATGGCGTG TACACCTATG CCGTTCAGCA GTCGTACGGG
GGAGCCAATG GCCTCCATCA CCTGGTCGAT ACCTGCCATA AAAAAGGCAT TGCGGTGGTG
CTGGACGTAG TATACAACCA CTTCGGACCG GAAGGAAATT ACCTCGGCAA CTTCGGCCCT
TACCTGACCG ACAAATACTG CACCCCCTGG GGAAAGGCCG TTAACTTCGA CGATGCCTGG
TGCGATGGGG TTCGGCGGTA TGTGCTCGAA AATGCCCTGA TGTGGTTTCG GGATTTTCAC
ATCGACGCCC TGCGGCTCGA TGCCGTTCAT GCCATCAAAG ATTTCAGCCC GGTCCATATC
CTACAGGAAC TCCGGCAAAA AGTCGATGAA CTTATGGCCG CTACGGGTCG CCGGTACTAC
CTCATTGTCG AGAACGACCT AAACGATCCG CGCTACATCG ACCCGCTGTC TGAGCATGGT
TACGGCATGG ATGCCCAGTG GAACGACGAA TTTCACCACG CGCTCCGGGT AGCCGCTGGC
GAAGAAAAAA CCGGTTACTA CGCCGACTTC GACGGGCTGA GCCACTTGGC GAAATCGTAC
AGAGATTCTT ACGTATATGA TGGTCAGTAC TCAGCCGTTC GTAACCGGTT TTTCGGTGGC
AAAGCCGAGA CGAATCCGGG GCAGCAATTC ATTGTCTTTT CGCAGAATCA CGACCAGGTG
GGCAACCGCA AGTTGGGCGA GCGGTCGAGT CAGCTGTACA GCTTCGATGC GCTCAAGCTG
CTGGCGGGCG CAGTACTGGT CAGTCCCTAC ATTCCGCTAC TATTCATGGG TGAAGAATGG
GGCGAAACGA GTCCGTTCTT CTACTTTGTA AGCCATACGG AACCGGAGCT GGTCGAGGCC
GTTCGGCAGG GACGCAAGGA AGAATTTGCT TCCTTTCATT CCGACGGCGA CGACGTGCCC
GATCCGCAAA GCCACGAAAC CTACCAGCAG GCCAAACTCC AGTGGAACCT CATCGGGCAG
AAACCGCATC AGCTACTGCT TCGCTATTAC CAGACCTTAC TTGCCCTGCG CCGACAGTTA
CCCGCCCTGG CTCATCTGGA CCGGACCAAA CTCAACGTCA TTGACGATCT GAAGGCCGAA
ACGCTGGTGT TGCACCGCTG GCATGACGAC CAGCATGTGC TGTGCCTGAT GAATTTTTCC
AAACAACCCC AATCCATTGC CCTGCCAGCC GTTGGCGAGC CCAACACAAG CTGGCAAAAA
GTACTGGACT CTGCCGATGA ACTGTGGCAA CCGGAACCCG CATCCGATCT GAGCCAGGCA
CCCGAATCGG TAACGGGTTC CGAAACCGTT CCAGTCCGGC CCGAGTCATT TATTCTTTAC
GCACAATCTC ATGAAAAATC CCGTTTCCAC CTACCGGATC CAATTTCACA AGGACTTTAC
CTTTCGTGA
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| Protein sequence | MTHLIDSGQR SLGVTFPNEH EASIQLWAPL AKYVAIKIYG HPTALPLTCE ELGYWHLTTT
QLKPGDLYTF KLDGQEEYPD PVSLCQPQGV HGPSQAVDTG SFSWTDQDWQ NPALDSYVLY
ELHTGTFTEE GTFQSLESKL DYLKALGVTA IEIMPVAQFS DSRNWGYDGV YTYAVQQSYG
GANGLHHLVD TCHKKGIAVV LDVVYNHFGP EGNYLGNFGP YLTDKYCTPW GKAVNFDDAW
CDGVRRYVLE NALMWFRDFH IDALRLDAVH AIKDFSPVHI LQELRQKVDE LMAATGRRYY
LIVENDLNDP RYIDPLSEHG YGMDAQWNDE FHHALRVAAG EEKTGYYADF DGLSHLAKSY
RDSYVYDGQY SAVRNRFFGG KAETNPGQQF IVFSQNHDQV GNRKLGERSS QLYSFDALKL
LAGAVLVSPY IPLLFMGEEW GETSPFFYFV SHTEPELVEA VRQGRKEEFA SFHSDGDDVP
DPQSHETYQQ AKLQWNLIGQ KPHQLLLRYY QTLLALRRQL PALAHLDRTK LNVIDDLKAE
TLVLHRWHDD QHVLCLMNFS KQPQSIALPA VGEPNTSWQK VLDSADELWQ PEPASDLSQA
PESVTGSETV PVRPESFILY AQSHEKSRFH LPDPISQGLY LS
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