Gene Slin_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5265 
Symbol 
ID8729031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6419593 
End bp6420582 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID 
ProductCheB methylesterase 
Protein accessionYP_003390035 
Protein GI284040105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GGGATATTGT CGTGATTGGT GCTTCGGCGG GTGGTGTGTA TGCGCTTCGA 
GAACTCGTAG CCGGTTTACC GCCCGATTTA TCGGCTACCA TTTTTATTGT TCAGCATATA
GCCGCAGATG CGCCAAGTTA TTTACCCCGT ATTTTGAATT TTGCGGGTAA TATCAAGGCA
ACTCAGCCTG TCGATGGAGA ACCGATTCAG CGGGGACACA TCTATGTTGC CCCGCCAGAC
CATCATCTGC TCATTGAAAA CGAAACGGTG CTGGTAAAGA GGGGGCCTAA AGAGAACCGG
TTCAGGCCTT CTATTGATGC CTTGTTCCGG TCGGCAGCTT ATTGCTACGG CCCGCGCGTA
ATCGGGGTCG TACTTACGGG TTTGCTCAAC GATGGGACGT CCGGCATGTG GACCGTAAAA
CGGTTAGGCG GGGTCAGTGT TATTCAGGAA CCCGAAGAGG CTCTTTATCC CAGTATGCCG
GAAAGCGTTC GGGAGAACGT GGTGGTCGAT CATAGTGTAC CCATTAGCGA AATGGCGGCC
CTGTTGACTA GGTTAACCCA GGAAACGGTT AATGAGCGGC CAATCCTTGC CCAAAAGGAT
CAGCTTCGTC TGCAAAAAGA AGTAAAGATC GCGGAAGAGG AAAATTCCTT TGATATGACA
ATTTTAGAAG AGGGTGACCT TTCGCCCCTG ACTTGCCCCG AATGCCACGG CGTAATGACA
AGTATTCAGG AAGGTACCCT CCTGCGCTAT CGCTGTCATA CCGGGCACGG CTATACGGCC
AGTTCGTTGC TGAGTGGCGT AAAACGATCC GTAGAAGAAT CTCTGTGGAA CGCCATTCGG
GCACTGGAGG AGACAGTGAT GCTCCTGGAG AAGGCTGCTC AGGTCCTGGA AGAGGGAGGT
AATGTAAGGG CCGCTCAGGA ATACCGAACT CAAATCAGCG AGGCTGAGTG GAAAATCCGG
CAGTTGCGTC CGCTGGTGTT TGCCGGATAA
 
Protein sequence
MTKRDIVVIG ASAGGVYALR ELVAGLPPDL SATIFIVQHI AADAPSYLPR ILNFAGNIKA 
TQPVDGEPIQ RGHIYVAPPD HHLLIENETV LVKRGPKENR FRPSIDALFR SAAYCYGPRV
IGVVLTGLLN DGTSGMWTVK RLGGVSVIQE PEEALYPSMP ESVRENVVVD HSVPISEMAA
LLTRLTQETV NERPILAQKD QLRLQKEVKI AEEENSFDMT ILEEGDLSPL TCPECHGVMT
SIQEGTLLRY RCHTGHGYTA SSLLSGVKRS VEESLWNAIR ALEETVMLLE KAAQVLEEGG
NVRAAQEYRT QISEAEWKIR QLRPLVFAG