| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5256 |
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| Symbol | |
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| ID | 8729022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6408316 |
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| End bp | 6411507 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003390026 |
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| Protein GI | 284040096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.015523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACTC TGCTCTACAT TTGTATCCAC TTCGTCATCT GTATCCAGCT GCATCAGACT
GGATGGGCGC AGGCAACGTG GCCGGGTGCC GCTCCCACGT TTCGAGTCGA TCACATTAGC
GTGCGCGACG GCCTGACCCA GGGGTCGGTG TATTACATGC TGAAAGATAG CCGGGGCTTT
CTGTGGTTCG GGACGCAGGA CGGGCTCAAT CGTTACGACG GGCACCACTT CCGAACGTAC
CGGCCCGCCC TTGGGAAAGC TGGTCATGTG CTGCCGGGCT CCATTCGGGG TATCAATATC
TTCGGTATTG TGGAGGACCC CGACGGGAAT CTGTGGATAG GTACCGAAGA GGGCCTTAAC
CGTTACGACC GGCAGCGCGA CCGGTTCGAT TGCTTTTTTG CCAACCGATC GGCCGCCAGT
CAGAAACGGC TGGCCAGTCG AATCCTGCCC TTCTTCGTTG ATGCCAATGA ACTGCTCTAC
CTGAGTGATG CGGAAGGGCT GGTGCGGTAT CATTACCGTA CGCAGCGTAA GACCATTCTG
GCTTCGGACC TGCATCCAAC AAAAGAATAC GATTTGCAAA GTTCGACCGT TCGAACACCC
GCAGGCGATG TCTGGTTGCA TGCACCAATG GGTCTGATAC GGTACAACCT GCGAAGCCGG
ACGCTCTCCC GGTATTTCAG CGACCATCCC GCCAATCAGT TTGGTGCGGC CCTGCCTGTC
TTTTCGTTCT TTATTGATAC AGATGACATT GCCTGGGTTG GTACCGGCAA CGGGCTGATT
CGCTTCGACC ACCATCAGAA AACGGCCCAA ACCTACGCCA TCGTCGGTAC CCGGCCCATC
AGTGAAATCT ATAGCATCGC CCCCGATCAG CGCAGTCGGC TCTGGTTAGG TACCCAGCGC
GATGGAGTTC TGTACTTCGA CAAGCGATCC CGGCTGTTTG GGCAGGTAAA CCGGTTTACC
CAGACTAGCC GCCAGCTGAG CGAGTTGAAA ATCAGTAAAG TGTACGTCGA TAAGCAGGGT
ATGATCTGGG CCAATATGGA CCCCGATGGA CTGGCCCGCA TTATACCCGA TGCCTTTCTG
TTTGGCGGGC TTAGTAAGGC CAGTTCGTAC GATACACTAC CGGCCAGCCA GAAGCTGAGC
AGCTATACCG TTCGGGGGTT TATGGAAGAG CGGTTCGACC GCCTATGGAT TCTTACCGAA
AATGGTATTG ATGTGCTGGA CCCCCGCACA AACCGGATTG TTGAGCGTTT TCTGACGCGG
AAACCCGCAA ATGCGGGGTT GCTATATCCG CAGGTTCGGT GCATCTATCG GGACCCGAAA
CGGCGGATTT GGGCGGGCAT TCCGGGGGGA GTACTGGCCT ACACACCGAC CACCAAAACG
TTCGAGCCAA TCCGTTTCGA ATCATCCGGC CCTGGCCTGG CTACGGACAG CTACGTCCGG
AATCTGGTTA GTATTTCGGA TACCATGCTG ATTGCTGCTA CCGAAAGCGG TTTATACGCA
TTGAATCCCC AACGGCGCAC GTGGTCTAAA GTACCGGTTC TGGCGAATCA GAATGTGTTT
AGCCTTTCCT ATAATGCCGC AACCCGCCAG CTTTGGGTTG GCACTTTCCT GAATGGCTAT
TACTGCTACC AGCTATCCGA AGGGCGAAAT CCATGGCGGT TTATTCGGTC CGGTCTGAAA
GGCTACACCA TATTGAACAT TAGGCCCGAC GACCGCCAGC CGACTCTCTG GCTCTCCAGC
GACCGGGGGC TGATCAATTT ACCGGATCAA AGCAATCGCT TTCGATTATA CACGGAGCAG
CAGGGGCTGG CCAACTCATT CGTATACGGG ACCCTGTCCG ATGCGGACAA CAATATCTGG
ATGAGTACAA ACCGGGGCGT CTCGCGCCTG AATCCCGCTA CGCAAATGAT TAAAAATTTC
ATGCCGAATG ATGGGCTTCA GGGATATGAA TTCAATGGGA ATGCGTTTCT GAAAACGGCT
TCCGGCGAGC TATATTTTGG GGGTGTAAGC GGCTTCAACC GATGCCTGCC GGATATATTT
CGGCCAAGTT TCTATAATCC ATACGTATAC ATTAATTCAC TGAACATCAA CGAGGAACCC
TTCGAGTCTG ATACGTACGT TGGCGAAGAT AAACGCATTC GGGTCACGCA TACGCAAAAC
ACCCTGTCGC TGGAGTTTGC GGCTTTGGAC TATGCCAGCA ACGGGCACAA TAGCTACCAA
TACCAGCTCA CTAACTACGA TGACCGCTGG GTGATGGCCG GAGAGCGGAA CTACGTTCGG
TATGCCAATT TGCCGCCTGG TAATTATATA TTTCAGGTAA AAGCCGCCAA TCAGGATGGG
CACTGGAGTG TACATACACG CACACTGGCC ATTTATATTG AACCGCCTTT TTGGCGGAAA
GGACCTTTTA TCATTCTGGT AATACTGATT TTGGCGGCAC TGGTTTGGGT ATGGATACAC
CACCGCGAAA ATGCCATTCG TACTCAGCAG GCCGACCGGG TGCGGTTAGC ATACGATATT
CAGGAACAGG TAAAAAAAGA CATCGCCCGG GATATACACG ACGAAATCGG AACCCGGCTG
GCAACCATTA AACTCTACAC AACCCAGCTT ACGCAGCTTG CCGGTGAAAC GCCGGGTATT
CTTACGCTTA AATCAACCAT ATTCCAACTG ATCAACGACA CCATCGGCGA TGTGCGGAAT
ATGCTCCGTA AGTTAAACCC CCAAACATTG GAGCGACATG GGTATATAGC CGCCGTCGAG
GAGTTGTTTT CCCGAATCAC CGCCAGTAGT ATTGTTCAGG CTCATTATTC GCTCGATGGC
ATCGCCGAGC AGGAAAATCG GCTTCTGGTC GAAGTAGAGG TAATGTTGTA TCGAATTACG
CAGGAACTGG TCAGCAATTC GCTCAAACAT GCCAGTGCTA CCCTGATTGA CCTCCACATA
ACTCAAAAGC ACGACCGGAT CGTGCTGGTA TATCAGGACA ACGGGCGGGG GTTTAACTAC
GAACAAACGC AGAAAAAAGC GTCGGGGCTG GGCATTGGAA ATATTGAATC CCGGGTGGCC
ATTCTGGGCG GTCGTATTAC GTGGAAAACC CAGGTCGGCC GAGGAATGCA GGCTACTATA
GACGTACCCA TAAGTCCGCT GGCGAAGCAT GCTGTGTCTG CAACGCAATC GAACCTACCC
TTTTCGAGTT AA
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| Protein sequence | MRTLLYICIH FVICIQLHQT GWAQATWPGA APTFRVDHIS VRDGLTQGSV YYMLKDSRGF
LWFGTQDGLN RYDGHHFRTY RPALGKAGHV LPGSIRGINI FGIVEDPDGN LWIGTEEGLN
RYDRQRDRFD CFFANRSAAS QKRLASRILP FFVDANELLY LSDAEGLVRY HYRTQRKTIL
ASDLHPTKEY DLQSSTVRTP AGDVWLHAPM GLIRYNLRSR TLSRYFSDHP ANQFGAALPV
FSFFIDTDDI AWVGTGNGLI RFDHHQKTAQ TYAIVGTRPI SEIYSIAPDQ RSRLWLGTQR
DGVLYFDKRS RLFGQVNRFT QTSRQLSELK ISKVYVDKQG MIWANMDPDG LARIIPDAFL
FGGLSKASSY DTLPASQKLS SYTVRGFMEE RFDRLWILTE NGIDVLDPRT NRIVERFLTR
KPANAGLLYP QVRCIYRDPK RRIWAGIPGG VLAYTPTTKT FEPIRFESSG PGLATDSYVR
NLVSISDTML IAATESGLYA LNPQRRTWSK VPVLANQNVF SLSYNAATRQ LWVGTFLNGY
YCYQLSEGRN PWRFIRSGLK GYTILNIRPD DRQPTLWLSS DRGLINLPDQ SNRFRLYTEQ
QGLANSFVYG TLSDADNNIW MSTNRGVSRL NPATQMIKNF MPNDGLQGYE FNGNAFLKTA
SGELYFGGVS GFNRCLPDIF RPSFYNPYVY INSLNINEEP FESDTYVGED KRIRVTHTQN
TLSLEFAALD YASNGHNSYQ YQLTNYDDRW VMAGERNYVR YANLPPGNYI FQVKAANQDG
HWSVHTRTLA IYIEPPFWRK GPFIILVILI LAALVWVWIH HRENAIRTQQ ADRVRLAYDI
QEQVKKDIAR DIHDEIGTRL ATIKLYTTQL TQLAGETPGI LTLKSTIFQL INDTIGDVRN
MLRKLNPQTL ERHGYIAAVE ELFSRITASS IVQAHYSLDG IAEQENRLLV EVEVMLYRIT
QELVSNSLKH ASATLIDLHI TQKHDRIVLV YQDNGRGFNY EQTQKKASGL GIGNIESRVA
ILGGRITWKT QVGRGMQATI DVPISPLAKH AVSATQSNLP FSS
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