Gene Slin_5255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5255 
Symbol 
ID8729021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6407777 
End bp6408319 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content55% 
IMG OID 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_003390025 
Protein GI284040095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000603191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTGTA TCGTTGACGT AGAAACGACT GGGGGCGTGA AAGGCCCTAC TCGCCTTACC 
GAAATTGCCA TCTTCCGCCA CGACGGGCAG CAGGTAGTTG ATTCATTCCA CTCACTGCTT
AACCCCGGCT GCCCGATTCC GCCGTTTATA CGGCACCTGA CGGGCATTTC TGACGAAATG
GTGCAGGACG CTCCAACCTT CGCAGACGTA GCCAACGATG TGCTGAACAT CACGCAGGAC
GCCATTTTTG TAGCGCATAA TGTTGGCTTC GACTTCAGTT TTATTCAGAA GGAGTTAAAC
TGGTTGGGGC ATGACTTTCT GCGACGAACA CTCTGTACGG TTCGTACCAG CCGAAAGCTG
CTGCCGGGTT ATCCATCCTA TAGCCTGGGA AAACTTTGTC GCTCGCTCGA AATCCCGCTG
AACGGTCGCC ACCGGGCACA GGGCGACGCA GCGGCTACGG TCCTGCTGTT TGAGATGCTG
CTGAAAAATG ACGCGCAGGG CCTGATTCCG CGGATTACCT CCCGCATTGA GTACACCCGT
TAA
 
Protein sequence
MYCIVDVETT GGVKGPTRLT EIAIFRHDGQ QVVDSFHSLL NPGCPIPPFI RHLTGISDEM 
VQDAPTFADV ANDVLNITQD AIFVAHNVGF DFSFIQKELN WLGHDFLRRT LCTVRTSRKL
LPGYPSYSLG KLCRSLEIPL NGRHRAQGDA AATVLLFEML LKNDAQGLIP RITSRIEYTR