Gene Slin_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5243 
Symbol 
ID8729009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6396223 
End bp6397311 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content50% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003390013 
Protein GI284040083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA TTTTGCTGGC GGGATTTCTG TTTATGACCC TGTCAACGAT GGCGCAAGTG 
CCGCAGCGGC TCGACTCCGT GATGCGGTCA ATGAACGCAC CGACCGGGCC GGGAGCCGCT
CTGCTGGTCC GGATAAATGG AAAAACGATC TACAGAAACG GTTACGGACT GGCAAATGCT
GAAACGAAGG CACGTATTAC GCCCGAAACC AACTTCCGGA TGGCCTCTGT TTCCAAACAG
TTTACGGCCA TGAGCATTCT ATTGCTGGAA AAAGACGGAA AGCTATCGGT CGATGATCCA
CTAACCCGTT TCTTCCCGGA TTTCAACCCG CTGGTTGGGA AAAAAGTACA AATCCGCCAC
TTGCTGACGC ACACGTCAGG TATTCTCGAT TATGAAGCGG TGATGAACCC ACAACAACGG
GAACAACTGC TGGATGCCGA CGTGCTGACG CTGATCAAAA ACCGCGACTC GCTTTATTTC
GAGCCGGGTA CGCAGTTTCG GTATAGTAAT TCGGCTTACT GTCTGCTGGC GTTGGTTGTT
GAACGGGTTT CCGGGAAGTC GTTTGCGTCA TTCATTAAAC AGCGGATTTT TCAGCCGTTG
CATATGAGTC AGTCGACGGT TTATGAAGCC GGGAAGCCGA TTAGAAACCG GGCAATGGGC
TACCGGGAAG AGGGTGGAAA ATTCGTTTTC TCGGATCAAA GTGTGACGAG TGCAACCAAG
GGTGATGGGG GCATATACAC CTCCCTCACC GACTATCAGA AATGGATAGC CGCGCTTGAA
ACCAATAAAC TACTTGACAT AAAGGCCGCG CTGGCACGAA CGGGCAAGGC GATTCCGCAA
ACGAGCGATA GCTTTTACGG AGCTGGCTGG TTTTATCGGC AGCACGGGAG TTTAACGCTG
TTTCACTCCG GTAGTACCTG TGGGTTCAAT AATTACGTTG TGAGTATACC CTCGGAACAA
TTTTTGATGG TTTGTTTTTC GAACAAAGCG AACAACAAAC TGAATGCATT AGCCATTATG
AAGATACTGG CCGAGTCCGG TTATACGAAG CTGGCCGATA TACTGACTTT AGACGATCTG
ACACAGTAA
 
Protein sequence
MKLILLAGFL FMTLSTMAQV PQRLDSVMRS MNAPTGPGAA LLVRINGKTI YRNGYGLANA 
ETKARITPET NFRMASVSKQ FTAMSILLLE KDGKLSVDDP LTRFFPDFNP LVGKKVQIRH
LLTHTSGILD YEAVMNPQQR EQLLDADVLT LIKNRDSLYF EPGTQFRYSN SAYCLLALVV
ERVSGKSFAS FIKQRIFQPL HMSQSTVYEA GKPIRNRAMG YREEGGKFVF SDQSVTSATK
GDGGIYTSLT DYQKWIAALE TNKLLDIKAA LARTGKAIPQ TSDSFYGAGW FYRQHGSLTL
FHSGSTCGFN NYVVSIPSEQ FLMVCFSNKA NNKLNALAIM KILAESGYTK LADILTLDDL
TQ