Gene Slin_5239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5239 
Symbol 
ID8729005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6392834 
End bp6393262 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390009 
Protein GI284040079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGT TATTACTCCT TACACTACTA TTGCTGGGAT TTACAACACT TTCGCTTTCG 
GCCTCAGCAC AAAACTACAA GCAAATTACG CCTGGTGGGG AAATAAAAGA CGAACACGGG
GCAACTATTG GTAGCATTAC CAAAGACCAA ATCATTCTGG ACAATAAAGG AAAGAAAATT
GCCTTCGTTG ATACGCAGGG TAATCTTGTT GATGCCAAGA CCAATAAAAA GCTGGGGCGT
ATGGGTAAGG ATGGAAAGAA TTACTATGAT GCGCAGGGCG AAATTGAGTT TAAGCTAAAA
GAGAACGGCA GTACCTGTGA CGTGTATGAC GCCAAAGGTA AAAAGATAGG CAATGTTCAC
AGTAGCATGA AAGGCTCCGC CTGTGCACTA GCCTGCTTTG AAAAAAGCCA CAAGAAAAAA
GCGAAATAG
 
Protein sequence
MKPLLLLTLL LLGFTTLSLS ASAQNYKQIT PGGEIKDEHG ATIGSITKDQ IILDNKGKKI 
AFVDTQGNLV DAKTNKKLGR MGKDGKNYYD AQGEIEFKLK ENGSTCDVYD AKGKKIGNVH
SSMKGSACAL ACFEKSHKKK AK