Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5234 |
Symbol | |
ID | 8729000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6388309 |
End bp | 6389976 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003390004 |
Protein GI | 284040074 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.547616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG AAACCATAAT TTTCTCTATG GCAGGCGTGA GTAAAAATAT TCCGCCTAAC CGACAAATCC TAAAGAACAT ATACCTTTCC TTCTTTTATG GTGCTAAAAT TGGTGTTTTA GGGCTTAACG GTTCTGGTAA ATCTACTTTA TTACGCATCA TTGCCGGTAT CGATAAAAAT TATACCGGCG AAGTCGTTTT CTCGCCCGGC TACTCGGTTG GTATGCTGGA ACAGGAGCCG CAGTTCACGC CCGGCCGCAC GGTTCGCGAA ATTGTTGAAG AGGGCGTTCA GGAAGTGGTT AATCTGTTGA AAGAATTCGA TGAGATCAAC GAAGCCTTTG GTGACCCCGA TGCCGACTTC GATAAGCTGA TTGCCCGCCA GGGTGAAGTG CAGGAAAAAA TTGACCATTT CAACGGCTGG GAACTCGACC AGAAACTGGA ACGGGCTATG GATGCCCTGC GCTGCCCCCC GCCCGACGCG CTGATCGACA ACTTGTCGGG TGGTGAAAAA CGGCGGGTGG CGCTTTGTCG GCTGCTGCTT CAGCAACCCG ATGTCCTGCT GCTCGACGAA CCGACCAACC ACCTCGATGC GGAATCCGTA TTGTGGCTCG AAGAACACCT GCGGTTGTAT TCGGGAACGG TTATTGCCGT GACGCACGAT CGCTACTTTC TGGATAACGT GGCGGGCTGG ATTCTCGAAC TCGACCGGGG CGAGGGTATC CCCTGGAAAG GCAACTACTC ATCCTGGCTG GAACAGAAGC AAAATCGCTT AGCCAGGGAG GAAAAGACGG AGTCGAAGCG GCAGAAGACG CTCCAGCGCG AGCTGGAATG GGTTAAAATG GCCCCCAAAG CCCGTCAGGC AAAATCGAAG GCCCGCCTGG GCGCCTACGA AAAACTCCTC AACGAGGACG CTAAACAGCG CGACGATAAG CTCGAAATCT TTATCCCGGC CGGACCACGT CTGGGTTCGA AAGTGATCGA AGCGGAAGAC GTGGCAAAAG CGTTCGGCGA CCGGCTTTTG TTTGAACATC TGGGTTTCCG ACTGCCACAG GGTGGTATTG TAGGAATCAT TGGTCCTAAC GGAGCGGGTA AAACTACGCT CTTCAAACTA ATTACCGGCC GGGAAAAGCC CGATGCGGGT ACGTTCGATG TAGGCGATAC GGTAAAAGTG GCTTACGTCG ATCAGGAGCA CGACGGTCTT GATCCAAACA AAACCGTTTT TGAGACAATT TCGGGTGGGA GTGAGTGGAT TATGATGGGC GGAAAGCAAT CGAACGCCCG CGCGTACGTG AGCCGGTTCA ACTTTGCCGG ATCGGATCAG GAAAAGAAAA TAGGCATGTT GTCGGGTGGT GAACGTAACC GCGTTCATCT GGCCATGATA CTGAAAGAAG GGGCCAATCT GTTGCTGCTG GATGAGCCCA CCAACGATTT GGATGTGAAT ACGCTTCGGG CGCTGGAAGA AGGCCTGGAA AACTTCGCCG GTTGTGCCGT CGTCATCAGC CACGACCGTT GGTTCCTGGA CCGGATTGCC ACGCACATTC TGGCGTTTGA AGGCGACTCG CAGGTGTACT GGTTTGAAGG CAACTTCTCG GAATACGAAG AAAATCGACG CAAGCGATTA GGTACTGAAG CTACTCCTAC CCGTATTAAG TACAAGAAAC TGGCGTAG
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Protein sequence | MSQETIIFSM AGVSKNIPPN RQILKNIYLS FFYGAKIGVL GLNGSGKSTL LRIIAGIDKN YTGEVVFSPG YSVGMLEQEP QFTPGRTVRE IVEEGVQEVV NLLKEFDEIN EAFGDPDADF DKLIARQGEV QEKIDHFNGW ELDQKLERAM DALRCPPPDA LIDNLSGGEK RRVALCRLLL QQPDVLLLDE PTNHLDAESV LWLEEHLRLY SGTVIAVTHD RYFLDNVAGW ILELDRGEGI PWKGNYSSWL EQKQNRLARE EKTESKRQKT LQRELEWVKM APKARQAKSK ARLGAYEKLL NEDAKQRDDK LEIFIPAGPR LGSKVIEAED VAKAFGDRLL FEHLGFRLPQ GGIVGIIGPN GAGKTTLFKL ITGREKPDAG TFDVGDTVKV AYVDQEHDGL DPNKTVFETI SGGSEWIMMG GKQSNARAYV SRFNFAGSDQ EKKIGMLSGG ERNRVHLAMI LKEGANLLLL DEPTNDLDVN TLRALEEGLE NFAGCAVVIS HDRWFLDRIA THILAFEGDS QVYWFEGNFS EYEENRRKRL GTEATPTRIK YKKLA
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