Gene Slin_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5217 
Symbol 
ID8728983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6369585 
End bp6370739 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003389988 
Protein GI284040058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCCA TGAATTACCG AGGGCCGTTC CGGGTACGGG CCGCCCAGAA ACCTTATCCA 
GAAATCCTGC ATCCGGGCGA TGCCATTGTG CGGGTAACCC GCTCCTGCAT CTGCGGATCA
GATTTACACC TCTACCATGG GCTTGTGCCC GACACACGCG TTGGCATGAC CTTCGGCCAC
GAGTTCATCG GGGTAGTTGA GGAAATTGGG TCGTCGGTTC AGAATCTCTC GGTAGGCGAT
AATGTGATCG TCCCCTTCAA CGTTGCCTGC GGGAAATGTG CCTTTTGTAA GCAGGGTTTG
TTTGGCAACT GCCACGAATC GAACCCCGAA GCCACCGCAG TAGGCGGCAT TTTCGGGTAC
TCCCACACCG CCGGGGGCTA CGACGGCGGA CAGGCCGAAT TTGTCCGGGT TCCTTATGCC
GATGTAGGTC CAACAATTAT TCCTGACTGG ATGGACCACG ACGATGCCGT CCTCCTGACC
GACGTTGTCC CCACAGGCTA TCAGGCGGCC GAAATGGGCG GTATCAAGAA AGGCGATACT
GTAGTCGTAT TCGGAGCTGG CCCGGTGGGT ATTATGGCCG CTAAATCGGC CTGGCTATTT
GGCGCTGGCC GGGTTATTGT CATCGACCAT CTGGAATACC GGCTCGACTT TGTCAAGAAA
TACGCGCAAT GCGAAGCTTA TAACTTCCGG TCGATGGAAG ATCCGGTTCT ATTCATCAAG
AAAACCACCG ACTGGTTTGG AGCCGATGTT TGTATTGATG CCGTGGGTGG CGATGCGGCC
GGTAGTGCGC TGCAAACCAT TACAGGACGG AAACTGATGA TTCAGGCGGG TTCGGCTACG
GCACTTCACT GGGCTATCAA TTCGGTCAAG AAGGGCGGTA TCGTCTCCAT TGTTGGCGTT
TACGGCCCCA CCGACAACCT GGTTCCCATC GGTAATGTCG TTAACAAAGG CATTACCATC
CGGGCCAATC AGGCTTCCGT CAAACGGCTG CTACCCAAGC TCATCGACCA CATTCAGGCG
GGTCGGCTCA ACCCGAAAGA GATCATTACC CACCGGGTAC CGCTGGAAGA AGTGTCGGAT
GCGTACCACA TCTTTTCGGC CAAACTGGAC AACTGTATCA AGCCAATTCT CATTCCCCCA
TCCGCCAGAC AATAA
 
Protein sequence
MLAMNYRGPF RVRAAQKPYP EILHPGDAIV RVTRSCICGS DLHLYHGLVP DTRVGMTFGH 
EFIGVVEEIG SSVQNLSVGD NVIVPFNVAC GKCAFCKQGL FGNCHESNPE ATAVGGIFGY
SHTAGGYDGG QAEFVRVPYA DVGPTIIPDW MDHDDAVLLT DVVPTGYQAA EMGGIKKGDT
VVVFGAGPVG IMAAKSAWLF GAGRVIVIDH LEYRLDFVKK YAQCEAYNFR SMEDPVLFIK
KTTDWFGADV CIDAVGGDAA GSALQTITGR KLMIQAGSAT ALHWAINSVK KGGIVSIVGV
YGPTDNLVPI GNVVNKGITI RANQASVKRL LPKLIDHIQA GRLNPKEIIT HRVPLEEVSD
AYHIFSAKLD NCIKPILIPP SARQ