Gene Slin_5211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5211 
Symbol 
ID8728977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6361708 
End bp6362709 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389982 
Protein GI284040052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.719757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GGGTCATGCG GCAGGTAGTG CCGATTTTAC TAGCCGCTGG CTTACTCTGG 
TATGTTCTGA ACGATGTACC ACTGGCCCAA ATTGGCGGTC AGTTCAAAAA AGCTGACTAC
GGCTTGCTGG GGCTGGTGGG TATCCTAATT GGCTTGTTTT ATGTGCTCCG GGCGGCCCGC
TGGCAGCTCA CGCTCCAGGC CATCGGTTAC AAGCCTTCTT TGTTTCGGGC AACGGTGGCA
CTCCTGGCCG GGTCGCTGGC GAGTATGATT GTGCCGGGGG CCGGTGAGCT TACCCGTTGC
GGCACCCTTC AGCAAACAGA CGGCATCCCC GTTTCGCAGG GCATTGGCTC GGTAGTCGCC
GAGCGAATCA TCGACTTATT TATGCTGGTT CTCGTGTTAC TGCTGACTGT TATCCTGGAA
TTTGGCCGGG CAAAAGCCTA CTTTTCCAAC CTGACACTTG CCTTACCAGG TACGCTGATG
CTGGTGGTGG CCCTAATACT GGCGATTGTA GTCGTCGGCA TCATCTGGCA GATACGCAGG
CGCACTACAG CACAAAGCCA CCCGTTTATC CTGAAATTTA CCGATCTGAT TCGGGGATTC
GGGCGGGGGT TTATGGCCAT TCGTCAACTT CCGAAACCGG GCCTGTTTGT ATCGATCACC
CTGCTCATTC AGGTTTTCGC CTGGCTAACA ACCTATGTCC TGCTGCTGGC TACCGACAGC
ACCCAGCACC TGCCGCCTGC CGCAGCTCTT ACCATTCTGG CGGTCAGTTC GCTGGGAGGG
CTGGCCGTAC CGACGCAGGG CGGCATTGGC ACTTACCATT TTCTGGTCAG CCGGGCGCTG
GTGCTGTATA GCTTCAGTAC CGCAGAGGGA GTTTCGCTGG CTACTTTCAT GCACGCCGTC
GGATTTGGGT TCAACCTGCT GTTCAGCAGC CTGAGTTTCC TGATCGTCCC GGTACTGGTA
CAGCAACGTA AAAAATTTGA CCGAGTACCC GAAAAAGGCT GA
 
Protein sequence
MNKRVMRQVV PILLAAGLLW YVLNDVPLAQ IGGQFKKADY GLLGLVGILI GLFYVLRAAR 
WQLTLQAIGY KPSLFRATVA LLAGSLASMI VPGAGELTRC GTLQQTDGIP VSQGIGSVVA
ERIIDLFMLV LVLLLTVILE FGRAKAYFSN LTLALPGTLM LVVALILAIV VVGIIWQIRR
RTTAQSHPFI LKFTDLIRGF GRGFMAIRQL PKPGLFVSIT LLIQVFAWLT TYVLLLATDS
TQHLPPAAAL TILAVSSLGG LAVPTQGGIG TYHFLVSRAL VLYSFSTAEG VSLATFMHAV
GFGFNLLFSS LSFLIVPVLV QQRKKFDRVP EKG