| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5197 |
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| Symbol | |
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| ID | 8728963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6342352 |
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| End bp | 6343830 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003389968 |
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| Protein GI | 284040038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0396933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC TGTTTCTTAA TCTATTCGTT TTAAGCGTTT TCGTCGTTCA GGCCAGCGCG
CAGACGACCC CGCTCAATGC GCCGGGCGGT TCGGTCACCA TTCAGCCTGG CTCCGGTCCC
GCCAACTCGC CGGGAACAGT GCAGCCGCAG GCAACAAGCC CAATGGGAAA CGCCACACCG
ACCGTGTCGG CCCTCGACCT GACACCAACG CTTACAACCA GTGGGTTTCG GCGGTTTAGC
GACCCCATGC TGGAATCGTT GATTCAGCAG GGGCTGGACA ACAGCCCCAA TCTCCGGGCC
GCGCTGAGCC GACTGGAGGA ATCACGAATC CGGGTTCGGA TTGCCCAGTC CTTTCTGTCG
CCTTCGCTGC GGAGTTCGGC GCTGGTCACG ACCCAGAGTT TATCGGAGCG ACGCCCGCTT
TCGGTACCTA ACCAGGCGGA TTTGCTGCCC CGATTTCAGC TAAATACCTT TCAGTTGCTA
CCCGTCGATG CGAGTTACGA ACTGGACCTG TTCAAGCGGA TTCGCAGCGG GATTGCCGTT
GCTAACTTGC AGGCGCAGGC CAGCGACGCC GACTTTCAGT CGTTTCGGCT TTCGCTGGCG
TCGGACATTG CCCGTACCTA CATGCTCATT CGGGGTAACG ACGCGGAGCA GGGCGTTTTT
CGCCGGAATA TTCAGTCGAG AGATACGACG CTGTCGATTC TTCGCGAGCG TTTTCGGGTG
GGGTTGATCA ACCAGATCGA CGTACAACGG GCCGAAACCG ACTATGCCGG TTTGCAGGTT
ACGCTCAAAG GGCTGGAGCG CGCCCGTGTT GAACTGGTGA ACGGTCTGGC CCAGCTTTGC
GGACAGGACC CGACTACCTT CCAGGTACCA TCCGGTGCTT TGCCGCAAAC AATCCCCACG
TATCCGTACG CCAGTGTTAC CCCTGAGCAG CTCCAGCGTC GGCCGGATCT GGTACAGTTT
ATCCGGCAAA ACCAGATTGC GGCTGCACAG GTAATTCTTC AGCAGGCCAG TACCCAGCCA
CGCGTAACGC TGGTTGGCTC GGGCGGGGTT CTGGCGGGTA AAATAGGGAA CTGGTTTACA
CCCAGCGCTG GAACGTACCT TGTTGGGGTT AACGCGTCGG TACCGCTTTA CGAAGGCCAC
CGCGCCCGGC AGAACATTGC GCTGTCGAAA CAACAGACGC AAACCAATCA GCAAGTGTAC
TTACAGGCGT TACAACTCGC CCAGCGCGAT GCCGAAACCG CCCTCGATAA CCTGACCATG
CTTCGTCAGC AAATAGACTT ACAAGGACAA ACACTTGCCC TGGCCCGCCG AACGGAGCAG
TATAACCGCG AACTATACGT GCGCGGTCTG GCTACCTATC TGGAAGTGCT GGATGCGCAG
CGGACCATTC TAACGACCGA ACAGCAACTG GTGCAACTTC ACAGTCAGGA AGTTCAGTTT
GCGGTAGCTT TGCTAAGAAC CATAGGCGGA GACTTTTAG
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| Protein sequence | MMKLFLNLFV LSVFVVQASA QTTPLNAPGG SVTIQPGSGP ANSPGTVQPQ ATSPMGNATP
TVSALDLTPT LTTSGFRRFS DPMLESLIQQ GLDNSPNLRA ALSRLEESRI RVRIAQSFLS
PSLRSSALVT TQSLSERRPL SVPNQADLLP RFQLNTFQLL PVDASYELDL FKRIRSGIAV
ANLQAQASDA DFQSFRLSLA SDIARTYMLI RGNDAEQGVF RRNIQSRDTT LSILRERFRV
GLINQIDVQR AETDYAGLQV TLKGLERARV ELVNGLAQLC GQDPTTFQVP SGALPQTIPT
YPYASVTPEQ LQRRPDLVQF IRQNQIAAAQ VILQQASTQP RVTLVGSGGV LAGKIGNWFT
PSAGTYLVGV NASVPLYEGH RARQNIALSK QQTQTNQQVY LQALQLAQRD AETALDNLTM
LRQQIDLQGQ TLALARRTEQ YNRELYVRGL ATYLEVLDAQ RTILTTEQQL VQLHSQEVQF
AVALLRTIGG DF
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