| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5182 |
|---|
| Symbol | |
|---|
| ID | 8728948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6326843 |
|---|
| End bp | 6327790 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389953 |
|---|
| Protein GI | 284040023 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.990358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTGGC AAAAAAAAGG ACTGGTTTAT AAGCCCGATG GGTCAAAACC GTTCAGCCGT
ACCCACGCAC AGGTTCCCTT TGGTTTCCCG ATGCAGGATA AAGTGCGGGT TTATTTTTCT
ACCCGCGACG AGCATAGTGC ATCAGCCGTA TCGTTTGTTG AGCTGAATCC AGATAATCTG
TCGGAAGTGA CGTACGTACA CGACAAGCCC TGCTTACAGA AAGGAGCTGT TGGTATGTTT
GACGAAACCG GCACTATGCC ATCCTGGTTT TTGCCCGTAG GCGACGAAAT CTGGCTGTAT
TATACCGGCT GGAACAAAAG CGAAACGGCC AGCTATCGGC TTTCTATTGG GTTAGCCATC
AGTCGTGACG GTGGCTTGAC CTTTGAGCGC AAGTACACTG GCCCTTTGCT CGACCGGTCC
ATATACGACC AGGTCTGGAT AGCGCAGCCG TGTGTGATGC GGGAAGAGCA ACCTGACGGA
TCTATTCGCT GGCGCATGTG GTATCTGTCC TGCACAAAGA TTGAGGTGAT CAATGGGCAT
CCCGAACCGT TTTATGATGT TAAGTACGCG GAGTCGGAAG ATGGTATCGA CTGGAAACGT
ACCGGGCACG TATGCGTAGG CTACGATGAG TTTACGGATG CCATTGGCCG GCCAACGGTG
TATAAAGACG GCGATTTGTA TAAAATGTAT TTTTCGTACC GCAACGCAAC CAACTACCGC
ACCGATGTTG AACGGAGCTA CCGGATTGGA TACGCCGAGT CGAAAGATGG CATAAGCTGG
GAGCGGAAAG ACGAGTTGGC CGGTATAGAA CGGTCGGCAG AGGGCTGGGA TTCAGTCATG
ATGGACTATT GCCATATTTT CAAACACCAG GACCAGTGGA TCATGTTATA TAACGGAAAC
GGGTTTGGTG CATCGGGATT TGGCTACGCA AATCAGCCAG CGAGTTGA
|
|---|
| Protein sequence | MTWQKKGLVY KPDGSKPFSR THAQVPFGFP MQDKVRVYFS TRDEHSASAV SFVELNPDNL
SEVTYVHDKP CLQKGAVGMF DETGTMPSWF LPVGDEIWLY YTGWNKSETA SYRLSIGLAI
SRDGGLTFER KYTGPLLDRS IYDQVWIAQP CVMREEQPDG SIRWRMWYLS CTKIEVINGH
PEPFYDVKYA ESEDGIDWKR TGHVCVGYDE FTDAIGRPTV YKDGDLYKMY FSYRNATNYR
TDVERSYRIG YAESKDGISW ERKDELAGIE RSAEGWDSVM MDYCHIFKHQ DQWIMLYNGN
GFGASGFGYA NQPAS
|
|---|
| |