Gene Slin_5181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5181 
Symbol 
ID8728947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6325906 
End bp6326730 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389952 
Protein GI284040022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.28607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG TTGCAAAATA CCTGATAAAA GTTGACGCCG AATTTAAGGA TGGACGGATC 
GTTCCTGAAA TTCCTTATGA GGAGGTGATG CGGTTGGTCA ACGAACCAAA CATCGTTATT
ATCAGAACCG GTATCCCGGA AAGTACGCTC CGTAGCGTCA TTGCCACTAC CCGCGCCTGG
GCCGACACAA CCCCGCTGGC TGAGGGACCG GATACGTTCG ATAACAACCA GCATAAACAG
CGGCTGCACA TCGCTAAAAT CCAGCAGGCA CCCCAGTTGT TTCACGACCA TACCTTCGAT
GCCATTCTGG ACCTCGACGA GTCGACCAAA CAAACACTGC TGAGCGTCTT TAACCCAATG
CGGCAATTCT GGAACGACCT GACCGGTAAC AATGAAGAGT ATGGTATCCG TAAAGGCCAG
CCTTATTTCC ATCCGCAGGT AACGCATTAC CCACTGGGCG GCAGCTTCTT TGGTCGCCAC
TGGCACCCAC TCAACCCGCA GAAAGTAGGG ACTATTCTGG CGTTGAATCA ATACGGAAAA
GACTACACAT CGGGCGGAAC CGGCTATGTT ATCAACGACC ACATTGTTGA GACAGAAGGC
TTCCAGGATA TGGGCGATAT CATTCTGTTC CGGTATGACC TGCCGCACTG GGTTAGCCCA
TCGAGCTTTG CCGACCGTTT CAGCTGGGAC GATCCGGCCG GGCGTTGGGT AGCTATTTTG
CCTTTCTATG ACCCCTGGGC AAAACCCGCC GATAAAGATG AACCACAGGG CTGGAAAGCT
CATATTCAAA CGGCCAAAAA CACTTCCTCT GAAGTTGCGG TTTAA
 
Protein sequence
MKEVAKYLIK VDAEFKDGRI VPEIPYEEVM RLVNEPNIVI IRTGIPESTL RSVIATTRAW 
ADTTPLAEGP DTFDNNQHKQ RLHIAKIQQA PQLFHDHTFD AILDLDESTK QTLLSVFNPM
RQFWNDLTGN NEEYGIRKGQ PYFHPQVTHY PLGGSFFGRH WHPLNPQKVG TILALNQYGK
DYTSGGTGYV INDHIVETEG FQDMGDIILF RYDLPHWVSP SSFADRFSWD DPAGRWVAIL
PFYDPWAKPA DKDEPQGWKA HIQTAKNTSS EVAV