Gene Slin_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5178 
Symbol 
ID8728944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6322876 
End bp6323850 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content56% 
IMG OID 
Productaldo/keto reductase 
Protein accessionYP_003389949 
Protein GI284040019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.712943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAT CCATAAACGA GCAGCTTACA TCCCGACTGG GGTTTGGTAC CTGGCAGTTT 
GGCGGTCCCA ACGTCGTAAA CGGCAACCCG ACGGGCTGGG GTGAGGTTGA CAAAGCGGAG
GCCATCCGCG CCGTACATGC CGCTCTGGAT GAGGGCATAA ACTTCTTCGA TACCGCTGAT
AGCTATGGCC GGGGCCAGGC CGAAACCATA CTGCATGACG CGTTTACACA GAAGTCAGCG
GCAAACGCCC TGATCTGTAC CAAATTCGGT AACCGGCAAA CGCCGGAGGG ACAACCCATA
CAGGACTATA GCGCAGCCTA TCTGACCGAA GCCGTAGAGG CCAGTCTGCA TCGGCTGGGT
GTCGATACGC TCGACGTGCT GCTACTGCAT AGCCCACCGG ATGCCTTCGA CTGGTCAGCC
TACGACCCGA AACCGTTCGA GGATCTGGTG CAGGCGGGGA AAATTCGTTC GTATGGGGTT
AGCTCCCGGT CGGTGTACGG TGCCCGGCGC GTTATGGAGG CTGGCTTTGG CAGTGTATTG
GAAGTAATTT ATAATGCGCT GGACCGCCGG GCTGAGGATC TGCTCTTCAC TGGTTCCAAT
GCCAGTCAGT ATTTTTTCAT TGGACGGGTA CCGCTGGCTT CCGGTTTTCT GAACCCGGCT
TACCTGACAC AGGACCCCGT TTTTCCGGCC GATCAGTACC GGCATTATCT GCCCGAGCGT
GACCGGAACT GGCTCCTTGA GTCTATGCGT AAACTGGCTT TTTTAGACGA GGAGCCGGGT
GGAATGGCAA TTTCTGCCTT ACGATTCAGC TTATCTAATG ACGCTATAGG CGTAGTTATT
CCCGGTATGC GGAACGAGCG GCAGGTCGCT GCCAATCGCC GGGCTGAAGA GCTGGGGTCG
CTATCGCCTG ATGTACTATC CCGTATTCGG CAGGCCGTTC CTGATGTAGC CGACCATTGG
AAACCCAAAG TTTAG
 
Protein sequence
MPVSINEQLT SRLGFGTWQF GGPNVVNGNP TGWGEVDKAE AIRAVHAALD EGINFFDTAD 
SYGRGQAETI LHDAFTQKSA ANALICTKFG NRQTPEGQPI QDYSAAYLTE AVEASLHRLG
VDTLDVLLLH SPPDAFDWSA YDPKPFEDLV QAGKIRSYGV SSRSVYGARR VMEAGFGSVL
EVIYNALDRR AEDLLFTGSN ASQYFFIGRV PLASGFLNPA YLTQDPVFPA DQYRHYLPER
DRNWLLESMR KLAFLDEEPG GMAISALRFS LSNDAIGVVI PGMRNERQVA ANRRAEELGS
LSPDVLSRIR QAVPDVADHW KPKV