Gene Slin_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5174 
Symbol 
ID8728940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6319613 
End bp6320584 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content53% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003389945 
Protein GI284040015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA TTCATTCGCC TTATTCCGGA CCGCCCGCCT ATCAGTACAA TGGTCATCTG 
CAAACCATCA TTCCCAGCCT GACACGCGCA GTGACCGGGA TCTCCTATGA GCGCGAACGC
CTGATACTGA CTGATGGTGA TTTTGTTGAC CTGGACTGGG TAAAGCAGGG GCAGAAGCGG
CTGGTAATAC TCACCCACGG CCTGGAAGGG GACAGCAACC GGCAATACAT TCGGGGAACG
GCCAAGTTAT TCGCCCAGCA CAACTACGAT GTTCTCGCCT GGAACTGCCG GTCGTGCAGT
GGCGAAATGA ACCAGGCTTT CCGCCTGTAT AATCATGGCG AAATTGGAGA CTTTGGTGAG
GTGATTGACC ATGCGCTTCA AACAAAGCGG TATCAGGAGC TTATTCTCGT TGGTTACAGT
ATGGGCGGCA ACATCACACT GAAATACCTC GGAGTGCACG GAAATCAGCT TTCCAAAGCA
ATCAAAGGCG GCATTGCAAT CTCGGCGCCA ACGGACTTAG GTGCCAGCGC CTGTCTGCTC
GACCGCCCAT CGAACCGGTT TTACCGGAAT CGGTTCATGA AAAAATTGCT GGTTAAAATT
TCCAGGAAGG CGCAGATGTA TCCCGGGCGG CTGGATATGA GCAAGGTCCG GCAGGTGAAA
CAGTGGAAAG ATTTCGATGA ATTCTTTTCA GCCCCGGTGA ACAACTACCG CGATGCCGAC
GATTTTTACA CCCAGGCGTC GGCCGTTAAT TTCATGCCGG ATATTGCAGT GCCTACGCTT
CTGCTCAATG CCCAGAACGA TCCACTACTT TCGGCAGAAT GCTCGCCTGA AGAATTGGCT
AAAGCCCACC CCCATATTTT TCTGGAAACC CCACGTACGG GTGGTCATGT TGGTTTTCAA
CTGGTTCGCG ACCCGCATAC CTATGCCGAA CGGCGCGCGC TTTGGTTTGC CCAGCGCCTG
ACGAATGGCT GA
 
Protein sequence
MPLIHSPYSG PPAYQYNGHL QTIIPSLTRA VTGISYERER LILTDGDFVD LDWVKQGQKR 
LVILTHGLEG DSNRQYIRGT AKLFAQHNYD VLAWNCRSCS GEMNQAFRLY NHGEIGDFGE
VIDHALQTKR YQELILVGYS MGGNITLKYL GVHGNQLSKA IKGGIAISAP TDLGASACLL
DRPSNRFYRN RFMKKLLVKI SRKAQMYPGR LDMSKVRQVK QWKDFDEFFS APVNNYRDAD
DFYTQASAVN FMPDIAVPTL LLNAQNDPLL SAECSPEELA KAHPHIFLET PRTGGHVGFQ
LVRDPHTYAE RRALWFAQRL TNG