Gene Slin_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5173 
Symbol 
ID8728939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6318737 
End bp6319612 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003389944 
Protein GI284040014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGT ACTCAATCAG AGATTTAGAG CAGCTGTCTG GCATTAAAGC CCATACCCTA 
CGCATCTGGG AACAACGCTA CGCGATTTTG ACGCCAGATC GAAGCGATAC CAACATTCGT
TCTTACGGTG ATGAGGACCT CAAGCGTGTT CTGAATATTT CGCTGTTAAA AGATCACGGA
TATAAAATTT CGGAGATTGC GAAGCTGTCG TCAGAAGAAC TGAGCAACGA AGTCGTGAAA
ATTTCCGAAC GGCAGCTCAA CTACCCCGAC CAGATTCATG CCCTGACGAT CTCGATGCTT
GATCTGAGCG AAGATCGGTT CGAAAAAATC ATCAATACCA ACATCAGTCA GTTCGGTTTC
GAGAATACGA TGATCAACAT CGTGTACCCA TTTTTAAGCC GTATTGGTAC GCTTTGGCTC
ACGGGTTCTG TAGGCCCGGC GCAGGAGCAC TTTATTACGA ACCTGATCCG ACAAAAACTG
ATTGTTGCCA TTGACGGATT ATCCGCCACT ACACCAAGTA ACGGCAAAAA GTATATGCTC
TTCCTGCCGG AAGGCGAATT TCACGAGATC AGCCTTTTGT TCGCGCATTA CATCATTCGC
TGCCGCGCCA ACAAGGTGAT TTATCTGGGC CAGAGCCTCC CCTTCAATGA ACTGGTATTT
GCCCACTCGC TGTATAAACC AGATTGCATT TTCTCGGTCA TTACATCGGT GCCGTCCAAC
CATGAAGTGC AGCCCTATGT CGATCGACTG GCAAAAGCGT TTCCTGATTC ACAGATTCTG
TTGACGGGTT ATCAGGTAGT GGGGCAGGAC ATCGAGACAC CAGAGAATAC CCGCATCGTC
AACCAAATCA ATGATTTAAT GCGCCTTGCC AGCTAG
 
Protein sequence
MSTYSIRDLE QLSGIKAHTL RIWEQRYAIL TPDRSDTNIR SYGDEDLKRV LNISLLKDHG 
YKISEIAKLS SEELSNEVVK ISERQLNYPD QIHALTISML DLSEDRFEKI INTNISQFGF
ENTMINIVYP FLSRIGTLWL TGSVGPAQEH FITNLIRQKL IVAIDGLSAT TPSNGKKYML
FLPEGEFHEI SLLFAHYIIR CRANKVIYLG QSLPFNELVF AHSLYKPDCI FSVITSVPSN
HEVQPYVDRL AKAFPDSQIL LTGYQVVGQD IETPENTRIV NQINDLMRLA S