Gene Slin_5149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5149 
Symbol 
ID8728915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6287532 
End bp6288782 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content51% 
IMG OID 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003389920 
Protein GI284039990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.766985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.218522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCA AGCGCGTAGT AGTGACCGGC CTCGGTGCGT TGACACCGAT CGGCAATGAT 
GTAGCCTCTT ACTGGAACAG CTTAGCCGCC GGTGTAAGCG GGGCCGGTCC CATTACAAAG
TTTGACGCCA GCAAATTTCG CACGCAGTTT GCCTGCGAAC TTAAAGGCGT AGATGTTACT
CAGTTCATTC CCCGACAGGA AGCCCGTAAA ATGGACGCGT TTACTCATTA CGCGCTCATT
GCCACCGACG AAGCCGTACG TGATTCAGGA TTAAACCTTG ACACCATCGA CAAGAACAAG
GTGGGCGTTA TCTGGGGGTC TGGCATTGGC GGTCTTAAAT CCTTCGAGGA TGAGATGATC
GACTATGCTA AAGGCGACGG TACACCCCGC ATTAACCCAT TCTTTATTGT CCGCATGATT
GCAGACAGTG CGTCGGGTCA GATTTCGATG CGGTATGGAT TTCGGGGGAC CAACTACGTA
ACGGTTTCAG CTTGTGCCTC AACAAACAAT GCCATTATTG ACGCCTTTAA CTACATTCGG
TTAGGGCGAC TAAATATGTG CGTAGTAGGT GGTTCAGAAG CGGCTGTTAC CCGGGCAGGT
ATTGGTGGAT TCAATGCCAA CCGAGCCCTG TCTGAACGCA ACGACTCGCC CCAGACAGCA
TCGCGGCCTT ATGATAAGGA TCGGGATGGT TTTGTGCTGG GCGAAGGAGC TGGCTCACTC
ATTCTGGAAG AATATGAGCA TGCCCAGTCT CGTGGTGCTA AAATATATGC TGAGTTAATT
GGCGGGGGGA TGTCGTCTGA TGCCTATCAC ATCACAGCCC CTCACCCCGA TGGTCTGGGT
GCTTTCCTGG GAATGCAGGA TGCACTGGCC GATGCGGGAA TTGACCCGAC TGAAATCGAC
TACATCAACA CGCACGGCAC ATCGACACCC ATTGGTGACC CTCAGGAATT AAAAGCCATT
CATCAGTTAT TTGGTGAACA TTCGTTTAAG TTGAACATCA GTTCGACGAA GTCGATGACA
GGGCATTTAC TGGGTGCCGC CGGAGCCGTT GAAGCCATTG CCTGTATTAA AGCACTGGAA
CATCAGCTTG TTCCGCCAAC GATTAATCAC TTCACCGACG ACGACGAAAT TGACCCCCGT
TTCAACCTAA CGTTCAATAC CGCACAGGAG CGCTCTATGA CGACTGTGAT GAGTAATGCG
TTTGGATTTG GCGGGCACAA CGCCATCGTT ATCTTCCGTA AACTTAGCTG A
 
Protein sequence
MTIKRVVVTG LGALTPIGND VASYWNSLAA GVSGAGPITK FDASKFRTQF ACELKGVDVT 
QFIPRQEARK MDAFTHYALI ATDEAVRDSG LNLDTIDKNK VGVIWGSGIG GLKSFEDEMI
DYAKGDGTPR INPFFIVRMI ADSASGQISM RYGFRGTNYV TVSACASTNN AIIDAFNYIR
LGRLNMCVVG GSEAAVTRAG IGGFNANRAL SERNDSPQTA SRPYDKDRDG FVLGEGAGSL
ILEEYEHAQS RGAKIYAELI GGGMSSDAYH ITAPHPDGLG AFLGMQDALA DAGIDPTEID
YINTHGTSTP IGDPQELKAI HQLFGEHSFK LNISSTKSMT GHLLGAAGAV EAIACIKALE
HQLVPPTINH FTDDDEIDPR FNLTFNTAQE RSMTTVMSNA FGFGGHNAIV IFRKLS