Gene Slin_5147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5147 
Symbol 
ID8728913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6286143 
End bp6286991 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content47% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IIA 
Protein accessionYP_003389918 
Protein GI284039988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.272149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTA CCGATTTCAA AACCGTAGCA GAAAAATATA AGGTTATCTT CTTCGATGCA 
TTCGGCGTGT TGAAAAACTC AGAGGGGTTA CTACCCGGTA TAGAGCATAC TTTCAACTGG
CTTCAGGAAA CCGGCAAAGA GTTCTACGTA CTCACCAATG ATGCATCGCG CGGCCCGCAT
GAGCTTGCCG AGTCTTATTA CAAACAGGGT TTTTACGCCA TACAACCCGA ACGCATTATC
TCGTCCGGTA TGCTCGCCCG CGAATACCTG GACCTAAAAG TACATAACGG CACCGTTGCC
TATCTGGGCA CCGAAAAGTC AGCCCATTAC CTGGAAACAA CAGGCCTTAA AACACTGCCC
ATCAGCCAGG TCGATTTGAA AGACGTAGCC GATATTAACG CCCTGGTTTT GCTCGATGAT
GAAGGGTTCG ACTGGAATAC CGATTTGACC AAAACGGTCA ACCTACTTAG AAAGCGAAAC
ATTCCGGTCA TTGTGGCTAA TACCGATACG ACGTACCCTG TTTCAAAAAC CCGGATTGCC
ATTGCTATTG GTGCCGTAGC CAAAATGATT GAAACCATCG TTGGAAAACA GTTCATCCGG
TTTGGCAAGC CCGACGCGCA ATTGTTCATG TTTGCCTACG AGCGGCTGAA GGATGTCAAT
AACATCAGCA AGCGGGATAT TCTGATGGTT GGCGATACCC TCCGAACAGA TATTTTAGGG
GGCAATAAAT TTGGGCTCGA TACAGTTCTG GTATTGACCG GCAATACCCA ACCGCAGGAC
GCTGAGGTAC TAATTCGTAG TACCGGCATA ATTCCTACCT ATATCTGCAA GTCAGTCATC
ATTCGGTAA
 
Protein sequence
MQTTDFKTVA EKYKVIFFDA FGVLKNSEGL LPGIEHTFNW LQETGKEFYV LTNDASRGPH 
ELAESYYKQG FYAIQPERII SSGMLAREYL DLKVHNGTVA YLGTEKSAHY LETTGLKTLP
ISQVDLKDVA DINALVLLDD EGFDWNTDLT KTVNLLRKRN IPVIVANTDT TYPVSKTRIA
IAIGAVAKMI ETIVGKQFIR FGKPDAQLFM FAYERLKDVN NISKRDILMV GDTLRTDILG
GNKFGLDTVL VLTGNTQPQD AEVLIRSTGI IPTYICKSVI IR