Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5147 |
Symbol | |
ID | 8728913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6286143 |
End bp | 6286991 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IIA |
Protein accession | YP_003389918 |
Protein GI | 284039988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.272149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACTA CCGATTTCAA AACCGTAGCA GAAAAATATA AGGTTATCTT CTTCGATGCA TTCGGCGTGT TGAAAAACTC AGAGGGGTTA CTACCCGGTA TAGAGCATAC TTTCAACTGG CTTCAGGAAA CCGGCAAAGA GTTCTACGTA CTCACCAATG ATGCATCGCG CGGCCCGCAT GAGCTTGCCG AGTCTTATTA CAAACAGGGT TTTTACGCCA TACAACCCGA ACGCATTATC TCGTCCGGTA TGCTCGCCCG CGAATACCTG GACCTAAAAG TACATAACGG CACCGTTGCC TATCTGGGCA CCGAAAAGTC AGCCCATTAC CTGGAAACAA CAGGCCTTAA AACACTGCCC ATCAGCCAGG TCGATTTGAA AGACGTAGCC GATATTAACG CCCTGGTTTT GCTCGATGAT GAAGGGTTCG ACTGGAATAC CGATTTGACC AAAACGGTCA ACCTACTTAG AAAGCGAAAC ATTCCGGTCA TTGTGGCTAA TACCGATACG ACGTACCCTG TTTCAAAAAC CCGGATTGCC ATTGCTATTG GTGCCGTAGC CAAAATGATT GAAACCATCG TTGGAAAACA GTTCATCCGG TTTGGCAAGC CCGACGCGCA ATTGTTCATG TTTGCCTACG AGCGGCTGAA GGATGTCAAT AACATCAGCA AGCGGGATAT TCTGATGGTT GGCGATACCC TCCGAACAGA TATTTTAGGG GGCAATAAAT TTGGGCTCGA TACAGTTCTG GTATTGACCG GCAATACCCA ACCGCAGGAC GCTGAGGTAC TAATTCGTAG TACCGGCATA ATTCCTACCT ATATCTGCAA GTCAGTCATC ATTCGGTAA
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Protein sequence | MQTTDFKTVA EKYKVIFFDA FGVLKNSEGL LPGIEHTFNW LQETGKEFYV LTNDASRGPH ELAESYYKQG FYAIQPERII SSGMLAREYL DLKVHNGTVA YLGTEKSAHY LETTGLKTLP ISQVDLKDVA DINALVLLDD EGFDWNTDLT KTVNLLRKRN IPVIVANTDT TYPVSKTRIA IAIGAVAKMI ETIVGKQFIR FGKPDAQLFM FAYERLKDVN NISKRDILMV GDTLRTDILG GNKFGLDTVL VLTGNTQPQD AEVLIRSTGI IPTYICKSVI IR
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