Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5127 |
Symbol | |
ID | 8728893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6269779 |
End bp | 6270396 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | phosphoribulokinase/uridine kinase |
Protein accession | YP_003389898 |
Protein GI | 284039968 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.426663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAA AACCGTTTAT CGTTGGTATT ACCGGCGGCA GTGCTTCGGG AAAAACGTCT TTTTTAAAGG GGGTTCTCAG TGCGTTCACA GAGGACCAGA TCTGCCTGAT TTCGCAGGAT AATTATTACC TGAGCCGCGA CATGATTCCG GTCGACGATC AGGGTATTCA TAATTTCGAT CTGCCCGAAA CGATTAACCA CCACCTGTAC GCCGAGCACA TCAGTCAGCT ACGAAATGGT GAAACCGTCA CGCAAAAGGA ATACACGTTC AACAACCCGA ACATCATTCC AAAGATGCTG ACGTTCCATC CGGCCCCCAT TATCGTGGTC GAAGGCATAT TCGTATTCCA CTTCCGCGAA CTGGCCGACC AGATGGATCT GAAAATCTTC ATCGACGCCA AAAACAGCAT CAAACTCGAA CGTCGGGTCA AACGCGACGC CGAAGAGCGC GGCTACGACC TCGACGATGT GATGTATCGC TGGAAGTACC ACGTAAAGCC CACCTATCGG CAGTTTATCA AGCCCTACCG CGCCGAAGCC GACATCGTCA TTCCAAATAA CAACCATTAC CAGAAAGGGC TGAATGTAGT TATCGAGTTT TTGAAAACGA AGGTGTGA
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Protein sequence | MTRKPFIVGI TGGSASGKTS FLKGVLSAFT EDQICLISQD NYYLSRDMIP VDDQGIHNFD LPETINHHLY AEHISQLRNG ETVTQKEYTF NNPNIIPKML TFHPAPIIVV EGIFVFHFRE LADQMDLKIF IDAKNSIKLE RRVKRDAEER GYDLDDVMYR WKYHVKPTYR QFIKPYRAEA DIVIPNNNHY QKGLNVVIEF LKTKV
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