Gene Slin_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5127 
Symbol 
ID8728893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6269779 
End bp6270396 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID 
Productphosphoribulokinase/uridine kinase 
Protein accessionYP_003389898 
Protein GI284039968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.426663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA AACCGTTTAT CGTTGGTATT ACCGGCGGCA GTGCTTCGGG AAAAACGTCT 
TTTTTAAAGG GGGTTCTCAG TGCGTTCACA GAGGACCAGA TCTGCCTGAT TTCGCAGGAT
AATTATTACC TGAGCCGCGA CATGATTCCG GTCGACGATC AGGGTATTCA TAATTTCGAT
CTGCCCGAAA CGATTAACCA CCACCTGTAC GCCGAGCACA TCAGTCAGCT ACGAAATGGT
GAAACCGTCA CGCAAAAGGA ATACACGTTC AACAACCCGA ACATCATTCC AAAGATGCTG
ACGTTCCATC CGGCCCCCAT TATCGTGGTC GAAGGCATAT TCGTATTCCA CTTCCGCGAA
CTGGCCGACC AGATGGATCT GAAAATCTTC ATCGACGCCA AAAACAGCAT CAAACTCGAA
CGTCGGGTCA AACGCGACGC CGAAGAGCGC GGCTACGACC TCGACGATGT GATGTATCGC
TGGAAGTACC ACGTAAAGCC CACCTATCGG CAGTTTATCA AGCCCTACCG CGCCGAAGCC
GACATCGTCA TTCCAAATAA CAACCATTAC CAGAAAGGGC TGAATGTAGT TATCGAGTTT
TTGAAAACGA AGGTGTGA
 
Protein sequence
MTRKPFIVGI TGGSASGKTS FLKGVLSAFT EDQICLISQD NYYLSRDMIP VDDQGIHNFD 
LPETINHHLY AEHISQLRNG ETVTQKEYTF NNPNIIPKML TFHPAPIIVV EGIFVFHFRE
LADQMDLKIF IDAKNSIKLE RRVKRDAEER GYDLDDVMYR WKYHVKPTYR QFIKPYRAEA
DIVIPNNNHY QKGLNVVIEF LKTKV