| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5124 |
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| Symbol | |
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| ID | 8728890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6265906 |
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| End bp | 6267483 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003389895 |
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| Protein GI | 284039965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.642325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAAC AACGCTCAAG TGGTTTACTG CTTCATATTA CTTCGTTACC CTCGGCGCAT
GGCGTCGGCG ATTTAGGCCC CGAAGCGTAT CGGTTCGCCG ATTTCCTGGA AGCTTCCGGG
CAAACCTACT GGCAGATTTT ACCACTCACA CCCGTTGATC CCGGTTCCGG ATTCTCTCCG
TACAGCAGCC CATCAGCCTT TGCCGGGAAT ATATTGATGA TCAGTCTGGA GAAACTGTCC
GACGAAAATT TATTAAGTGG CGACGATCTG GCAGTATTTA ACGAGCAACC TATCCGTACT
GTAAGCGTTA CAGAACCTTC GTCTGCCGAT GGCGATACTG GTATAACACC CGCATTGAGT
CTGTCGGCAC CCTCCACCCT CCACGCGGCC TGGATTAAAA AACAGCCTCT GCTAACCCAG
GCGGCTAAAA CATTTTTGCG GGATGCCACA CCCGCCCAGC GCAGCGATTA TGATCGATTC
TGCGCCTGGC AGGCCGACTG GCTGAATGAT TACGCGCTCT TTACGGCTTT GCAGGAGTCA
ACGAAGGAGC CCGTATGGGT ACGCTGGCCT ACTGAAATTG TGCGCCGTAA TCCGGACGCT
CTGGCTCGGC AGGCTACCTT GTTACAGGAT GAGATTGAGG TCATTAAAGT ACTTCAGTAT
TTCTTTTTGC GGCAATGGAA TGAACTAGCC GCTTATTGCT ACACCCGGAA GATTCACCTG
ATTGGCGATA TCCCGATCTA CGTTCAATTT AACAGCGCGG ATGTGTGGGC AAACCCGGAG
CTGTTTAAGC TGGACGAAAA TTTTCAGCCG TTATTTGTTG CCGGTGCTCC GCCGGATTAT
TTCAGTGAGG ATGGACAGCG CTGGGGTAAT CCCATTTATG ATTGGGCTGA GCACGAACGC
ACTGGCTTTG TCTGGTGGAT GCGTCGGCTG CGGCATCAGA TGTCGCTCTA CAGCCTGACC
CGGCTCGACC ATTTTCTGGG CTTCGCCGTG TACTGGGAAA TTCCGGCCAG CGAACCAACG
GCTAAAGTGG GTGAGTGGGT CAAAGCACCC ATCGAGTCAT TCATGCATGC CATGCACCGG
CAGTTCGTTC AGCTTCCCAT TATTGCCGAA GATCTGGGAG CGAAAGCCGC CGATATTCAG
CCTTATCTAC GGCATTATGG TATACCGGGT ATGCGAGTAG TTCAGTTTGG CTTCGGTGCC
GATATGCCTA CCTCGACGTA TGCGGTACAT AATCATGCCG AAAACTTTGT CGTTTATTCC
GGCACGCACG ACAACAACAC AACCTTGGGC TGGTTTCGGG AGCTGGACAA GCTCCATCGC
CAGCGGATGA ACGATTACCT GGGGATTAAA GTAACCGATA AGAATGTAGT CGATCAGGTG
TGTCGGCTCA CGATGCAGTC GGTGGCTCGT CTGGCCATTA TGCCCATTCA GGATGTGTTG
AACCTCGATG AAACTCACCG GATGAACACG CCAGGTCTGG GTGGGCGAAG CTGGCAATGG
CGACTGCAAC CCAACCAACT GACCGATGAA GTGGCGGCTA AACTGCTGCG GCTCACAAAG
ATGACCGGCA GAGGGTAG
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| Protein sequence | MLQQRSSGLL LHITSLPSAH GVGDLGPEAY RFADFLEASG QTYWQILPLT PVDPGSGFSP
YSSPSAFAGN ILMISLEKLS DENLLSGDDL AVFNEQPIRT VSVTEPSSAD GDTGITPALS
LSAPSTLHAA WIKKQPLLTQ AAKTFLRDAT PAQRSDYDRF CAWQADWLND YALFTALQES
TKEPVWVRWP TEIVRRNPDA LARQATLLQD EIEVIKVLQY FFLRQWNELA AYCYTRKIHL
IGDIPIYVQF NSADVWANPE LFKLDENFQP LFVAGAPPDY FSEDGQRWGN PIYDWAEHER
TGFVWWMRRL RHQMSLYSLT RLDHFLGFAV YWEIPASEPT AKVGEWVKAP IESFMHAMHR
QFVQLPIIAE DLGAKAADIQ PYLRHYGIPG MRVVQFGFGA DMPTSTYAVH NHAENFVVYS
GTHDNNTTLG WFRELDKLHR QRMNDYLGIK VTDKNVVDQV CRLTMQSVAR LAIMPIQDVL
NLDETHRMNT PGLGGRSWQW RLQPNQLTDE VAAKLLRLTK MTGRG
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