Gene Slin_5121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5121 
Symbol 
ID8728887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6260496 
End bp6261218 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003389892 
Protein GI284039962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA TTGAAACCCA AAGTATCGCC AAACGCTATG TGATGGGTAC CGAGGTAGTA 
GAGGCCCTCA AGTCAATCAC CATCAGCATT AATAAAGGAG AGTACGTGGC ATTTATGGGG
CCATCCGGTT CCGGCAAGTC CACCCTCATG AACATTGTCG GCTGCCTCGA CTCGCCCACA
TCCGGGAAGT ACATCCTGAA TAACCAGGAC GTAAGCAGTA TGGGCGAAAA CGAACTGGCG
GAAGTACGGA ACAAAGAAAT TGGCTTCGTA TTCCAAACGT TCAACCTGTT GCCCCGGCAA
ACATCGCTCG AAAACGTGGC ACTGCCGCTC ATTTACGCAG GCTACAGCAA AGCCGACCGT
ACCGAAAAAG CGATGATGGC CCTGAAAAAT GTCGGTCTGG AAAATCGGGC CGGGCACCGG
CCTAACGAAT TATCGGGTGG ACAGCGGCAA CGGGTAGCCG TAGCGCGGGC ACTGGTCAAT
GACCCGAGTA TTCTGCTTGC TGACGAACCA ACCGGTAACC TCGATACCAA AACTTCCTAC
GAAATCATGG ACCTTTTCGA CCAGATTCAT AGCAAGGGCA ACACCGTGAT CATGGTTACG
CACGAAGAAG ATATTGCTGA GTACGCGCAC CGAATTATCC GACTCCGCGA CGGGCTAATC
GAAACGGATC GCGCTAATAC GAACATCCGC AAGGCGAAGG CCCTGATGCA GTCGCTGGAG
TAA
 
Protein sequence
MNIIETQSIA KRYVMGTEVV EALKSITISI NKGEYVAFMG PSGSGKSTLM NIVGCLDSPT 
SGKYILNNQD VSSMGENELA EVRNKEIGFV FQTFNLLPRQ TSLENVALPL IYAGYSKADR
TEKAMMALKN VGLENRAGHR PNELSGGQRQ RVAVARALVN DPSILLADEP TGNLDTKTSY
EIMDLFDQIH SKGNTVIMVT HEEDIAEYAH RIIRLRDGLI ETDRANTNIR KAKALMQSLE