Gene Slin_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5106 
Symbol 
ID8728872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6244324 
End bp6244890 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID 
ProductNADH-quinone oxidoreductase, chain I 
Protein accessionYP_003389880 
Protein GI284039950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAA CGAATCGATC TAAACAAGTC AGCAATAAGG AAATGACGCT GGCCGAAAAG 
ATGTACCTGC CCGCTATTGT TGGCGGGTTA GCCATCACGA TCAGCCACTT TTTCCGCAAG
AAGCCGACAA TTCAGTACCC TGAGGTAAAA AAATACCTTG GCCCCATTTA TCGTGGGCAT
CACATTCTGA AACGGGATGA ACAGGGACGG GAGCGTTGCA CCGCCTGTGG ACTATGTGCT
GTAGCCTGCC CGGCAGAAGC TATATCTATG GTAGCGGCAG AGCGTAAAAA GGGCGAAGAA
AACCTTTACC GTGAGGAGAA GTATGCCGCT GTTTACGAAA TCAACATGCT GCGTTGTATC
TTCTGCGGTT TGTGCGAAGA GGCTTGCCCT AAACAGGCCG TTTATCTTCG TCATGATCGC
ATGGTTCCTG TTTTTCAGGA GCGCGACGAC GTCATTTATG GCAAAGATCG GCTGGTCGAG
AACATGAACG ACCGATATAT TCGGGTAGCT AATTCGGAAG TGCAGGCTAC GCCGACGGAG
CCCAGTCTGA CACGCGCAGC AACCTAG
 
Protein sequence
MQLTNRSKQV SNKEMTLAEK MYLPAIVGGL AITISHFFRK KPTIQYPEVK KYLGPIYRGH 
HILKRDEQGR ERCTACGLCA VACPAEAISM VAAERKKGEE NLYREEKYAA VYEINMLRCI
FCGLCEEACP KQAVYLRHDR MVPVFQERDD VIYGKDRLVE NMNDRYIRVA NSEVQATPTE
PSLTRAAT