Gene Slin_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5100 
Symbol 
ID8728866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6238194 
End bp6238694 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content49% 
IMG OID 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_003389874 
Protein GI284039944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA ACGAAGAAGT TGCGCAGATT ATACTAAATC AGTTTGGTGA AACGGTTACG 
GACTTTGATG ATCCATATGA CCTCCTGACC TGTTCGACCA GCCGGGACCA GATTGTTTCG
CTGGTCAAGT TTTTGAAAGA ACACCCAACG CTACAGATAA GCTTTCTGAC CGATATCACG
GCGATTCATT ATCCCGATTC GGCTGGCAAA GAGTTCTGCG TTGTGTATCA CCTGCACAGC
CTGACCAAAA ACTTCCGGAT ACGGATCAAA GTATACCTGA CCACGGATGA TCTGCACATC
CCGACGCTTA TTCCCCTCTT TGCCGGTGCC AACTGGATGG AGCGCGAAAC CTTCGACCTG
TTCGGTATTC TCTTCGATGG TCACCCCGAC CTGCGCCGAA TTCTGAACAT GGAAGAAATG
GATTACCATC CGATGCGCAA GGAATATCCG CTGGAAGATG CCACCCGGGA AGACAAAATT
GATGCACTGT TTGGACGATA A
 
Protein sequence
MLTNEEVAQI ILNQFGETVT DFDDPYDLLT CSTSRDQIVS LVKFLKEHPT LQISFLTDIT 
AIHYPDSAGK EFCVVYHLHS LTKNFRIRIK VYLTTDDLHI PTLIPLFAGA NWMERETFDL
FGILFDGHPD LRRILNMEEM DYHPMRKEYP LEDATREDKI DALFGR