| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5093 |
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| Symbol | |
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| ID | 8728859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6227944 |
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| End bp | 6229716 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003389867 |
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| Protein GI | 284039937 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.556464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA ACCAGAAGCA ATCGCTGATG ACCATCCTGT TTATGGGGGC TACACTAACG
ACTCCTTTAT TTGCACAGGA CGTCCAATCG GCCTTGAAGG ATGTAGAAGC TGAGCGATAT
AATAAGGCGG GCCAAACGCT AACGCAGTTG GCCACCAGCT CGCCGACGGC TGATAATCAG
TTTTATCTGG GCTATTATTA TCTGAGAAGC GGACAACTAG ATAAGGCGAA AGCAACCTTC
GAAAAAGGTG CTGCTGCCGA TGCTAAAAAT TACTTGAATA ACATTGGTCT GGCAGGTGTA
GCCATGGCCA AAGGTGATGG CGCTACAGCT AAAGGCTTGA TCGATAACGC CGTTGCCCAA
ACAAAAAGCA AGAATCAGGA TGTATTGATT CGTGGTGCAG AAATGTACAC GTTGTCTGAT
CAGCCAAAGC AGAATGACCC GGCAGCTGCC CTCAGCCTGC TCACTGTGGC CGATGAGAAA
GACAAGAAAA ACGAAAACGC CGAGATCGAA ATGCTGATGG GCGACGCGTA CTTTCTGAAA
AATGATGGCG GTAACGCGAT CACGAAGTAC GAAAACGCCC TGGCAATCAA CCCTAATCTT
GCCGAGGCCA ACTACAAAAT TGGCCGTTTG TATCTGCGTG GCAAAAACTA CCAGAAAGCG
CAGGACTTCT TTAAGCTGGC TATCCAGAAT GATGCCGAAT TTGCACCTAC GTACCGTGCT
TATGCCGATG CACTGGCTAA CTCACGTGCT TACAAAGCGG CTGCTTCGAA TTACGAGTTG
TACGTACAGA AAAGCGGTAC AACGGATCCG GAAATGCTGC TGGACGTAGC TCGTTATAAA
TTCCTGGCTC AGGATTACCA GGGTGCTATC GCTTATCTGG ATCAACTGAA AGGGAAAATC
AACAACCCAA TTATTGACCG GATGTACGGT TGGGCTTACT CTGCTCTAGG CAAGAACAAC
GAATCTGTTG AATCGCTGAA CCGCTTTATC TCTACGGCTC CTCAAAAAGT AATGGCCGAC
GATTATAAAT ATCTTGGCCG TGCATATGCT CAGATAGGAA CGCCGGAGAG CGATTCGTTA
AGCATTGTTA ACCTGGAAAA AGCGGCCCCA ATGGACACGA CAGAGAACCT GTATCGTGAA
ATTGGCGAGC GTTACTACAA AACAAAGCGT TACGATAAAG CAGCTTCGTA TTATAAAAAG
ACGATTTCGA CGGATAAGAA GCCTCAGAAT AATGACTTCT TGTGGTTGGG TCTCTCTAAC
TACCAGTACG CACCACGTGT AGGCCGGGAC AGCTCTGCCA CACCAATGGA TACAGCTCAG
ATTCGTCAGG TAAAACAACA GTATTATCTG GCGGCAGATT CGGCCTTTGC GCAGATGGCA
TCACGTATTG AAGCCGATGG CAAGAAATAC CCACTTGCTT ATTATTATCG TGCAGGTGCT
AATTACTATG CTTATCCCAA AGAGCAGGAA AAAGCAGCTG ACTTAGCAGG ACCTCTGTAT
GAGAAATTCA TCGAGCAGGC TACAACTCCA GATGCAACAG ACAAGACAGA CTACAAACGT
TATCTGATAA CTGCTTACAA AGCACTGGCT GGTTTTGCTC TGCTGAAGAA AGATGACGCT
AAAGCGAAAG AGTACTTTGA TAAAGTACTG GCAATTGACC CAAATGACGA AAGTGTGAAG
AAAGCACTGG AAGGGCCTAA AGCGGCACCA GCAGCACCGG CGAAAGCAGC GCCTAAGGCA
GCACCGGCTA AAAAGAAAGT GGCCGGTAAA TAG
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| Protein sequence | MMNNQKQSLM TILFMGATLT TPLFAQDVQS ALKDVEAERY NKAGQTLTQL ATSSPTADNQ
FYLGYYYLRS GQLDKAKATF EKGAAADAKN YLNNIGLAGV AMAKGDGATA KGLIDNAVAQ
TKSKNQDVLI RGAEMYTLSD QPKQNDPAAA LSLLTVADEK DKKNENAEIE MLMGDAYFLK
NDGGNAITKY ENALAINPNL AEANYKIGRL YLRGKNYQKA QDFFKLAIQN DAEFAPTYRA
YADALANSRA YKAAASNYEL YVQKSGTTDP EMLLDVARYK FLAQDYQGAI AYLDQLKGKI
NNPIIDRMYG WAYSALGKNN ESVESLNRFI STAPQKVMAD DYKYLGRAYA QIGTPESDSL
SIVNLEKAAP MDTTENLYRE IGERYYKTKR YDKAASYYKK TISTDKKPQN NDFLWLGLSN
YQYAPRVGRD SSATPMDTAQ IRQVKQQYYL AADSAFAQMA SRIEADGKKY PLAYYYRAGA
NYYAYPKEQE KAADLAGPLY EKFIEQATTP DATDKTDYKR YLITAYKALA GFALLKKDDA
KAKEYFDKVL AIDPNDESVK KALEGPKAAP AAPAKAAPKA APAKKKVAGK
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