Gene Slin_5081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5081 
Symbol 
ID8728846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6213154 
End bp6213768 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389855 
Protein GI284039925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.465912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT TTCTCATTTA CCTTGGTTTA GGTTTCGATC ATATTACAGA CCCGCGCGGC 
TACGACCATA TTTTGTTCGT TGTTGCGCTT TGTGCGGTAT ACACCCTTCA GCAGTGGCGG
CAGGTGCTGA TTTTGGTAAC GGCATTTACG ATAGGGCATT CCATTACGCT GGCGCTGGCA
ACATTGCAGG TTATCCACTA CAAAACTGCG CTGATTGAAC TGCTCATTCC CATTACTATT
CTTGTCACCG CTATTACCAA CTTCTTTTTC CAGGAGCCTA AATCGTGGCT GACGACCGAT
AAACCACCGA AACGCTCCTG GCGTTATGGG CTGGCACTAC TGTTTGGCCT TATTCATGGG
ATGGGTTTTT CTAATTACCT GCGCAGCTTA CTCGGCCGTG AAGCAGAAAT TATAAAACCC
CTGCTTGCGT TTAATATTGG TCTGGAGATC GGTCAGTTAT TCATTGTCGC CTTAATCCTG
GGCGTCGCAT TCGTCGTCAT TGAACTTGGC AAAACCAGCC GCCTGCGGTG GACGCTCGTT
ATATCGGGAA TCGTTGCGGG CATGGCGCTG GCGCTGATCT TCGATAATGC GTATTTAAAG
GAACTACTGG GGTGA
 
Protein sequence
MDDFLIYLGL GFDHITDPRG YDHILFVVAL CAVYTLQQWR QVLILVTAFT IGHSITLALA 
TLQVIHYKTA LIELLIPITI LVTAITNFFF QEPKSWLTTD KPPKRSWRYG LALLFGLIHG
MGFSNYLRSL LGREAEIIKP LLAFNIGLEI GQLFIVALIL GVAFVVIELG KTSRLRWTLV
ISGIVAGMAL ALIFDNAYLK ELLG