Gene Slin_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5080 
Symbol 
ID8728845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6212639 
End bp6213151 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content52% 
IMG OID 
ProductCarbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein 
Protein accessionYP_003389854 
Protein GI284039924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.186899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTAA TAAAAGCTGT TCGGGGTAAT CACCCCACCT TCGGCGACAA CTGCTGGTTT 
GCCGATAATG CAACCATTGT TGGCGACGTA CTTATGGGGC GGGATTGCAC CGTCTGGTTC
AACGCTGTGA TTCGGGGCGA TGTCAACTCC ATCGTCATTG GCGACCGGAC CAACATTCAG
GATGGTGCCG TTATTCACTG CACATACCAG AAGTTCAAAA CGACCATTGG CAGTCGTGTT
TCGATTGCGC ATAATGCCAT AGTTCACGGC TGCACCCTCG AAGACGACGT ACTTATTGGT
ATGGGTGCCA TAGTGATGGA TGGGGCAGTG ATAGGCAAAG GCAGTATTAT TGCGGCCGGT
GCCATTGTTA CCCAGCATAC CCAGGTGCCG CCCGGTTCAA TTTATGCCGG TAATCCGGCC
CGGCTGCTGA AAGCCGTTTC GCCCGAACAG GCTGAAATAT TCAGCCGTAC GGCCAATAAC
TATGTCATGT ATGCCGACTG GTTTAAAGAA TAA
 
Protein sequence
MALIKAVRGN HPTFGDNCWF ADNATIVGDV LMGRDCTVWF NAVIRGDVNS IVIGDRTNIQ 
DGAVIHCTYQ KFKTTIGSRV SIAHNAIVHG CTLEDDVLIG MGAIVMDGAV IGKGSIIAAG
AIVTQHTQVP PGSIYAGNPA RLLKAVSPEQ AEIFSRTANN YVMYADWFKE