Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5076 |
Symbol | |
ID | 8728841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6202394 |
End bp | 6204844 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | penicillin-binding protein 1C |
Protein accession | YP_003389850 |
Protein GI | 284039920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.634438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAACGG CTGGGTCAAT ATTCAGAAAC GTTGGCGGTA TTGCCAAACG GTTGTGGCGA TACCGTCTCG TAAAAACGTT TATCGCAGCG GTATTGATTT TTTTAGGGCT TGATTTCTCT TTTCCCATCG ACACCGCCGT TCCCTATTCA ACCCTAATCA CCGCCCGCGA CGGGTCCATT CTGCATGCCT TCCTGAGCCG CGATGATAAG TGGCGAATGT ACGCGGAGCT GGACGAGATT ACCCCTACCC TGCGCGACGC CATTCTGTTC AAGGAAGACA AATATTTCTG GTATCATCCC GGCTTCAACC CTATAGCCAT GCTCCGGGCC GCTGCCCGAA ACCTGCTGAC CGGTCGGCGA ACGTCGGGGG CATCGACCAT TACGATGCAA ACCGTTCGCC TGCTCGAACC CCGTGAACGA ACCTACACCA GCAAGGTTAT CGAGCTATTC CGGGCGCTGC AACTGGAGTT ACACTTTTCT AAAGAGCAGA TTCTCCAGCT TTACCTGAAT CTGATCCCCT ACGGCGGCAA TATCGAGGGG CTGAAGTCGG CTTCGCTGCT CTACTTCGGC AAAACACCGG ATTTGCTAAG TCTGGCCGAA CTCACCACCC TGACCATTAT TCCGAATCGG CCGTCGAGTT TGCGGTTGGG CGTTCATAAT GCGCTGGTTG TTCAGGCGCG TAACCGCTGG CTTACCCGCT TCCGCACGAG CCACCTCTTC GACGAAACCG TCATTGCCGA TGCCCTCAAC GAACCCCTCA CCGCTTATCG CCGGGAGGCT CCACAGTTGG CACCACACCT CGCACGTCGG CTTAAATCAG AGAACCCGAA TGCCCCCATC GTTCGGTCGT CACTGAATCC ATCCACACAA GCCACCACCG AACGACTGAT GCAGCAGTAC GCCAATCGCA TCAGGGCGTA CGATATCCAC AATGCAGCGG TGTTAATTGT GGATAACTTA TCGAGGGAAG TGATCGCCTA TGTGGGTTCG GCCGACTTCA CGAATACGCT TGATGGCGGG CAGGTGGATG GCATACAGGC GGTGCGGTCG CCGGGGAGCG CGTTGAAACC CATTTTGTAC GGACTGGCGT TCGATGCGGG CATAATTACC CCGAAGACAA AACTAGCCGA TGTACCAACC AACTTCAGCG GTTACCAACC CGACAATTAC GACCGGCGTT TCAACGGCCC CGTTACGGCC GAGTTTGCCC TCGCTAATTC CCTCAACATT CCGGCGGTGG CCCTCCTAAA AGAAATCGGT ACGCCGACCC TCGTCTCGAC GCTCCGGAAA GCGGGCTTTT CGACCGTCAA AAAACAAGCA AAGGAGTTGG GATTATCCAT GATTCTGGGC GGCTGCGGTG TCACGCTGGA AGAAATGACG AAACTGTATA CGGGTTTGGC CAATGGTGGG ATGGTTGGGG AGTTGGCGTT TACCCCATCG GGACGCCGAA CCGCCCCGGC CCCTCCCCTT AAGGAAGGGG AGGGGAGAAA TAGGGCGCTC TTGTTGCCCC CCTCCCCTTC CTTAAGGGGT GGGGTAAACA CCGAGATTCC CCTCCTCTCA CCCGAAGCGG CTTACCTGGT TACCCACACC CTCACACAAA TTACCCGGCC GGACTTGCCG AATAACTTCG ATAACAGTTA TCACCTGCCG CGAATCGCCT GGAAAACGGG AACCTCCTAC GGTCGGCGGG ATGCGTGGAG TATCGGGTAC AACCAGCGGT ACACGATTGG CGTGTGGGTG GGTAATTTTT CGGGCGTAGG CGTGGCCGAG TTAAGCGGGG CGAATACAGC TACCCCTTTG CTGTTTCAGC TTTTCAACGT ACTGGATTAC AACTCATCCT TGGGTTGGTT CAGAGCCCCG GATGCCCGCT CGAAATTAAG CACCCGGCTG ATCTGCCCCG AAACGGGCGA GGTGCCGGGC GAGTTTTGTA CCAATCCCGT AACCGACTAC TGCATCATGG GCGTTTCGCG GTACAGACGC TGCCAGCACC AAAAGGCCGT CTTTACCAAT TCGGCGGGCA CGATTTCTTA CTGCGCCTAC TGCCTGCCGG ATACGGGCGC CGTTCGACGT GCTTACCCGA ATGTATCGCC GGAAGTAATG GCGTTTTACC AAAGCCATCG TATTCCGGTT CAAATCCCGC CCCCTCACAA CCCATCCTGC GAACGGGTCT TTGAGGGCAC CGGCGGTAAC CATCTGGGGC CGCGCATTAC GAGTCTGAAC GACGGCAGCG AGTATTTCAT CAACCCCAAA CAAGCCGCTG AACTAGAGCT TAGTTGCCAG ACTTCTACCG ATGTGCAAAC CGTATTCTGG TATTTGAATG ATAAACTATA CCGGCGGGCT AAACCAACAG AAGCCGTGTT TTTCAAACCC CGGCCGGGGG CGTTAAAGAT TTCCTGCGCC GATGATAAAG GCGGCAGCAA TGACATACGA ATCCTGATCA AACCGGAATA A
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Protein sequence | MLTAGSIFRN VGGIAKRLWR YRLVKTFIAA VLIFLGLDFS FPIDTAVPYS TLITARDGSI LHAFLSRDDK WRMYAELDEI TPTLRDAILF KEDKYFWYHP GFNPIAMLRA AARNLLTGRR TSGASTITMQ TVRLLEPRER TYTSKVIELF RALQLELHFS KEQILQLYLN LIPYGGNIEG LKSASLLYFG KTPDLLSLAE LTTLTIIPNR PSSLRLGVHN ALVVQARNRW LTRFRTSHLF DETVIADALN EPLTAYRREA PQLAPHLARR LKSENPNAPI VRSSLNPSTQ ATTERLMQQY ANRIRAYDIH NAAVLIVDNL SREVIAYVGS ADFTNTLDGG QVDGIQAVRS PGSALKPILY GLAFDAGIIT PKTKLADVPT NFSGYQPDNY DRRFNGPVTA EFALANSLNI PAVALLKEIG TPTLVSTLRK AGFSTVKKQA KELGLSMILG GCGVTLEEMT KLYTGLANGG MVGELAFTPS GRRTAPAPPL KEGEGRNRAL LLPPSPSLRG GVNTEIPLLS PEAAYLVTHT LTQITRPDLP NNFDNSYHLP RIAWKTGTSY GRRDAWSIGY NQRYTIGVWV GNFSGVGVAE LSGANTATPL LFQLFNVLDY NSSLGWFRAP DARSKLSTRL ICPETGEVPG EFCTNPVTDY CIMGVSRYRR CQHQKAVFTN SAGTISYCAY CLPDTGAVRR AYPNVSPEVM AFYQSHRIPV QIPPPHNPSC ERVFEGTGGN HLGPRITSLN DGSEYFINPK QAAELELSCQ TSTDVQTVFW YLNDKLYRRA KPTEAVFFKP RPGALKISCA DDKGGSNDIR ILIKPE
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