| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5075 |
|---|
| Symbol | |
|---|
| ID | 8728840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6200910 |
|---|
| End bp | 6202304 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003389849 |
|---|
| Protein GI | 284039919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC AATTCTTCGG TGCCGCCCGA ACCGTAACCG GCAGCAAACA CCTGATCACC
ACCATCGGAG GAAAACAGAT TCTGCTCGAC TGCGGACTCT TTCAGGGAAT TAATACAGAC
GAACTGAACC AGCAATTTGG GTTCGATCCG GCCCAGGTCG ATTACATGGT TCTTTCTCAC
GCCCATATCG ACCATACCGG GTTGATTCCC CGGCTTGTAC GGCAGGGGTT CAGCGGACCC
ATTTATACGA CCTCGGCCAC CATCGATCTG TGCGAAGTGA TGCTGATGGA TAGTGCCCGT
ATTCAGGATC GGGACCTCGA ACGGGTCAAT AAACGGCGTA CCCGGCGGGG CGAGCCCGAA
CTGGAGGTAC TGTACGATGA AAAAGACGTT GAGCAGGCAC TCGGCCAGAT GCAGGCTGTT
GAGTACAACA AGCCATTCGT TATCTGCGAC GAAGTAACGG GCTTGCTGAC GGACGCGGGC
CATCTGCTCG GCAGCGCGTC TGTTAGCCTG ACAATTCGGG AAGATGCGGT CGAAAAACAC
CTGTTCTTTA GCGGAGACAT CGGCCGCCCC GACGACAAAA TTCTGCGGTC GCCCCAGCCT
TTTCCGCAGG CCGACTACAT CATCTGCGAA TCGACCTACG GCGACCGGCT TCACGAAGCA
GAGCCCGATA TGAAGGCGCA TTTACTGAAA ATTGTGGAGG AGACCTGCAT TGAAGGCCAG
GGCAAGCTTA TTATACCGGC TTTTGCCGTT GACCGCACGC AGGAAATTAT CTACGCGCTC
GACCAGCTTT CCAGCGAAGG GCGGTTACCC CGTCTGCCCG TTTATATCGA CAGTCCCATG
TCGGTGAAAG CGACCGATGT GATGCGCGAT CATGAGGAGG ATTTCAACCC GGACATTCTA
TCGTACATTA AAAAAGACGG TGATGCGTTT CAATTTCCCA ACCTGCATTA TATAACTGAC
GTTGAGGACT CGAAAGCCAT CAACGACAGC AAAGAGCCGT GTATCATTAT TGCGCCATCG
GGCATGGCCG AAGCCGGACG TATCAAACAC CACATCAAAA ACAATATTAC CAAACCCAAC
ACGACCATAC TGATGGTTGG CTATGCATCG CCATCCAGCC TGGGTGGGGC ACTCAAACGG
GGCGATAAAG AGGTAACTAT TTTTGGCGAG CGGTTTCCGG TTCTGGCTAA AGTGGCCATT
ATGGATTCGT TTTCGGCGCA CGCCGATTAC CGGGAGATGC TTCAGGTGTT GAGCTGCCAG
GATGCTTCGC GGGTTAAAGC CCTGTTTCTG GTTCATGGTG AGTACGACAA GCAGCTGATC
TGGAAAGAAC ATTTAACGGA AGCCGGTTTC CAGTATATCG ACATTCCCGA CATGCGGCAG
AAAGTAACGC TTTGA
|
|---|
| Protein sequence | MTIQFFGAAR TVTGSKHLIT TIGGKQILLD CGLFQGINTD ELNQQFGFDP AQVDYMVLSH
AHIDHTGLIP RLVRQGFSGP IYTTSATIDL CEVMLMDSAR IQDRDLERVN KRRTRRGEPE
LEVLYDEKDV EQALGQMQAV EYNKPFVICD EVTGLLTDAG HLLGSASVSL TIREDAVEKH
LFFSGDIGRP DDKILRSPQP FPQADYIICE STYGDRLHEA EPDMKAHLLK IVEETCIEGQ
GKLIIPAFAV DRTQEIIYAL DQLSSEGRLP RLPVYIDSPM SVKATDVMRD HEEDFNPDIL
SYIKKDGDAF QFPNLHYITD VEDSKAINDS KEPCIIIAPS GMAEAGRIKH HIKNNITKPN
TTILMVGYAS PSSLGGALKR GDKEVTIFGE RFPVLAKVAI MDSFSAHADY REMLQVLSCQ
DASRVKALFL VHGEYDKQLI WKEHLTEAGF QYIDIPDMRQ KVTL
|
|---|
| |