Gene Slin_5068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5068 
Symbol 
ID8728833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6194626 
End bp6195885 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content45% 
IMG OID 
Productacyltransferase family protein 
Protein accessionYP_003389842 
Protein GI284039912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.108917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTT ACTATCTGGT AATGCATCCA GGTATATACG TAAGTAATTT CACATTACAG 
ATGGATATCC TTCAGCCCCA ACGACAATAT TATATTGACT GGATTCGAGT GATCGCCTTT
ATGATCCTGA TTCTCTTTCA CTGCTCCATG CCATTTGTGC AGTTTGGCTG GGAAGTGAAG
AACGCGGAAC ATTCCATTTT TCTGGATCGA CTGATTATCT GGCTGCATCA ATGGCGGTTG
CCTTTGCTTT TTTTCATTGC CGGTGTAGGG GTTAGCTTTT CCCTGCGAAA ACGCTCAGTC
CTGTCTTTTA TGGGCGAACG GGTTATCCGG CTGTTTATAC CGCTACTTTT CTCCATGTTC
TTCGTCATTC CTATACAGGT GTACGTAGAG CGCCTGCAAA AAAAGGAGAT CAACGAGAGT
TACTGGAGCT TCTACCCATC CGTGTGGGAT TTGGTACCGT ATCCGGAAGG TACGCTGACG
TGGAGCCACT TGTGGTTTGT CGTTTATCTA TTTGTCTTTA CAATTTTGTT AGTACCCATT
TTTGCCCTAT TTAAAATCAA GGCACTGCAA CGGTGGAAAC AACGGCTCGA TCCGGTATTC
GCCCATCCCA TAGCCAACCT GTCATTAGCC CTTCCGTTTA TCCTGCATTA CTTCGCTTTT
TACATCAGGT GGCCCATTCA GGGGAGTTTA CTCGACGACT GGTTTCTCTT CAACTCGTCC
ATTACATTTT ACTTTCTGGG TTATTTCCTC GCTGACCTGT CGTCTTTCTG GAACACGTGC
GAAACCTATC GAAACTATTT TCTGGCGGTT GCTGTCTTGT GCGTGATCAT TTTATTCTGG
AAGTATTATT GGACGGTCGC CTTACCTACT CAGCAGAACG ACGCCCTGTA TCTATATGGT
TTTTTTGACG GTCTTCACAT CTGGGCAATT ATTCTTACGG TTATTGGTTT TGCCAGACGG
TATCTTAATT TTTCAAATCC AGCACTGGCA TATCTGACCA CCGCCGTTTA CCCCTTTTAC
ATCCTGCACC AAACGATCAT CGTTGCCAGC GGGTATTATG TAGTTCAATG GAGCAGTCCA
ATTTGGGTGA AGCTGCTGGT GCTCATTATC ATCTGCTTTA TCCTGCTGTT CGGGTTGTAC
CATTTTCTGA TCCGTCCGTT TGTCTTTACC CGCATTCTGT ATGGATTGAA ACCGAAACGA
ATCAGACTAC CCAAAAGCGA ATTCTTCCGG GACCAGGCTT CGGTTGTGTC AACTTTATAA
 
Protein sequence
MQPYYLVMHP GIYVSNFTLQ MDILQPQRQY YIDWIRVIAF MILILFHCSM PFVQFGWEVK 
NAEHSIFLDR LIIWLHQWRL PLLFFIAGVG VSFSLRKRSV LSFMGERVIR LFIPLLFSMF
FVIPIQVYVE RLQKKEINES YWSFYPSVWD LVPYPEGTLT WSHLWFVVYL FVFTILLVPI
FALFKIKALQ RWKQRLDPVF AHPIANLSLA LPFILHYFAF YIRWPIQGSL LDDWFLFNSS
ITFYFLGYFL ADLSSFWNTC ETYRNYFLAV AVLCVIILFW KYYWTVALPT QQNDALYLYG
FFDGLHIWAI ILTVIGFARR YLNFSNPALA YLTTAVYPFY ILHQTIIVAS GYYVVQWSSP
IWVKLLVLII ICFILLFGLY HFLIRPFVFT RILYGLKPKR IRLPKSEFFR DQASVVSTL